Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00314 ATGCTGCAAGCTCTGTCAATTAAGATAAACATCGCAAGCTGTGATATTTTGCAGTCTTTTCAGCATAAAGGCTTTTGGATACAACGGGATGCTGGCTGTTTAGCTGAAGAAAACGTGGGATATGATAATTCTTCCAGAATTGAACCCAAGCGCAGTCATCAGTGGTTTATGGATACAGGTGAACCAGAAATGTTCAGCAGCAAGAAACAAGCAGTTGAAACTGTTAGTAGCAGGCCAGTTTCAGGAGTTTCACATGTGAATGTTTCTCAATGGGACACAAATTCTGGATTTCACTCAGTCACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAAAACATGCCATCAATTATGAGTGGAAATGTGAATATGGGAAGAAAGGATTTTGAGGATCAATATGGTAATAATCCATCTGTGGGATTGTCAATATCTCATTCCTTAGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATCCCTGCTGCATCCATGGGACACTCCTATAGTAGGGAAGACAATAATACAATTTCAGTAGGTGCTGGCTATAATAAGAATGATGGCAATATTTCATTGGGCCCGACTTATAATACCAATGGAAATGACAATACCATTGCCATGGGGACCAGAATAAGTAAGACTGATGACAATATTCTTTCAATGGCTCACACCTTCCATAAAGGCGATGGGGGTTTTATGTTGATGGGCCATAATTATAAGGGTGATGAAAGTATCTTATCAATGGGTCAGCCTTTTGACAAGGGAGATGGAAATTTCATTACAATGGGTCAATCATATGACAAGGAAGATGGCAATTTAATATCTCTGGGTACATCATATAGCAAGGGACATGAGAGCTTTATATCAGTGGGTCCAACCTATGGTAAATCAGCAGAAGATTTCATAACTGTTGCTCCTTATGACAAGGGCACTGATCATATAATATCAATGGGCACTACATATGATAAGGTAGATTCAAATATTTCATCAACAGTTTCATCATATGACAGAGGAGATTCTAGTTCTTTACCTGTGGATCTAAACCCCCACAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCAGGATGATCCTGAACCAAATTCCTCGAGTGGAATCATTAGTGGCTATGATCTGTTGATGGGAAGCCAGAACTCGACTCAAGTTTTGGATAACCAGAATGATCTTACAGAGTCCAACTCTGAATCACATGTAAATAGCGTTCCTAAACCCAATACTAAAAATGATATTGTCACTAAGAACAAAGAACCAAAGACAACCAAGAAGGCTCCTGCTAATAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCTTGGTCACGGGAGAAAAGTCTCAAGGGAATCATAAAAGGAACTGGGTATTTGTGTTCATGTGACGACTGCGAGCAATCAAAGGCTCTTAATGCCTATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCAAACAATCACATATACTTTGAGAATGGAAAGACCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCCACCATCAACCAAAAGAACTTCCGTATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTGATCATTCCATCTTGATTTCAATTTTCTTGAAACTTCTAAACAGTGGTAGATATGTAATCTGTTAATAGTGAGTGCATGGCAGCTTAATAGTTTAAAACACTATTTAAAATTCAAAAGTTTTAGTCGATGCTTCTTGTAGGAACTTAATTGTTCTATTTATGTTAATGAATGTCTTTTTGTGGTTCAGTGTCATTCTTTCCATCACAATTTGGTGATGTCTTGTCATATTTTTTAAGTTCCTTTCAAACCATGTTCTT 2039 0.386 MLQALSIKINIASCDILQSFQHKGFWIQRDAGCLAEENVGYDNSSRIEPKRSHQWFMDTGEPEMFSSKKQAVETVSSRPVSGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLARTVNLVDKNMPSIMSGNVNMGRKDFEDQYGNNPSVGLSISHSLADPSSCLNFGGIRKVKVNQVRDSDNCIPAASMGHSYSREDNNTISVGAGYNKNDGNISLGPTYNTNGNDNTIAMGTRISKTDDNILSMAHTFHKGDGGFMLMGHNYKGDESILSMGQPFDKGDGNFITMGQSYDKEDGNLISLGTSYSKGHESFISVGPTYGKSAEDFITVAPYDKGTDHIISMGTTYDKVDSNISSTVSSYDRGDSSSLPVDLNPHKGQSSTISFGGFQDDPEPNSSSGIISGYDLLMGSQNSTQVLDNQNDLTESNSESHVNSVPKPNTKNDIVTKNKEPKTTKKAPANNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCEQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVIIPS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00314 598 SUPERFAMILY Porins 150 346 - -
Pste5g00314 598 Pfam Tify domain binding domain 491 546 IPR032308 -
Pste5g00314 598 MobiDBLite consensus disorder prediction 421 458 - -
Pste5g00314 598 PANTHER AUTOIMMUNE REGULATOR 29 538 - -
Pste5g00314 598 MobiDBLite consensus disorder prediction 421 440 - -
Pste5g00314 598 MobiDBLite consensus disorder prediction 355 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00314 Pste-Chr5 2100986 2103337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00314 450 579 PHD Transcription Factor Family AT3G53680 55.385 1.27e-41 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00314 5 2100986 2103337 Pste5g00314 5 2100986 2103337 ECH
Pste4g02415 4 17189343 17192723 Pste5g00314 5 2100986 2103337 ECH