Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00306 AGACAAACCCTATCCTTAGTGTGTTAAGAGAAAGAGGTTGGAGAAGCTGAGAATGGCACACGCATTTGGGCTCTGACACGAAAGCAAGGAAGGGTGTGTGCTCCTGGCATTATTAAAATAAAGAGATGGTGAACGTGATGGAATGGCAGAAGCAACGTTGGCAAGAAAACGGGAACGCGGAGATGATGTACGTCAAAGTCATGACCGACGAACAGCTGGAGACTCTCCGCAAACAGATTGCCGTTTACGCGACCATCTGCGAACAACTGGTCGAGATGCACAAAACCATCTCTGCTCACCAAGATCTCGCAGGGATTAGGTTGGGAAATATGTATTGTGATCCATTGTTAGGGTCTGGTGGGCACAAAATAGCTTCGAGGCAGCGTTGGACTCCAACAGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGCACTGGCACTCCCAGCAAGGAAAAGATCAAGGAGATCACTGCTGAGCTCACCCACCATGGCCACATTTCTGAGACTAATGTCTATAATTGGTTCCAGAACAGGCGTGCTCGCTCCAAAAGAAAGCAGCACAACGTTAATGCCCATTCAGACCTCGACACTGAGGTTGATTCTAAGGATAAAAAGACTAAGCCCCACGATTTTCAGTCCCCGCCTCCCGTTTCTGCTGCACCTTTGAGCTTCCACAACCATGATAATTTCCACTACTTGAATTCAGACTCCAACAAACCAGATTCCATGTTCCCGTCTCATGGGAGTTTAAGTTCCACTACAAATTTCAACCATGTGCCTGTTTTTGATGGCCTTCTATCCAACTCAAGAAGCGACTATCTTACTGGAAAAATGGAAGCACCTGAGAACTACGACTTATATCAGCCAGCAGGCGACTACAACATGGCAGGCTGACATTAAATGTAATTTCTGACGACTGTGATTATCTGTAAAAAATTGCTTGTGTGGTTTTGGGCTGTATTGATGAGAAAAATTGAACCAATTACATGAAACGTATAGTCTATAGTATATAAATACAGTGATATTTTATAATGGTAAGTGGACATTTTACTTGATAATGGAATATCACTGAGTTCATATTGAGATTGTGAAGCTGACTTTTTTGTTAACGGTGTACTATAAGCATCTTTTACCTTAGCTTTGGTTTTTGGTTGAAAGAGACGTGGTTAAGAACGTAC 1186 0.4351 MVNVMEWQKQRWQENGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTISAHQDLAGIRLGNMYCDPLLGSGGHKIASRQRWTPTAMQLQILERIFDQGTGTPSKEKIKEITAELTHHGHISETNVYNWFQNRRARSKRKQHNVNAHSDLDTEVDSKDKKTKPHDFQSPPPVSAAPLSFHNHDNFHYLNSDSNKPDSMFPSHGSLSSTTNFNHVPVFDGLLSNSRSDYLTGKMEAPENYDLYQPAGDYNMAG 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00306 258 MobiDBLite consensus disorder prediction 143 181 - -
Pste5g00306 258 Pfam Homeodomain 85 145 IPR001356 GO:0003677
Pste5g00306 258 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Pste5g00306 258 Gene3D - 86 153 - -
Pste5g00306 258 CDD homeodomain 85 147 IPR001356 GO:0003677
Pste5g00306 258 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Pste5g00306 258 SMART HOX_1 83 150 IPR001356 GO:0003677
Pste5g00306 258 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 256 IPR044559 GO:0003700
Pste5g00306 258 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00306 Pste-Chr5 2061371 2070808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00306 21 258 Wox Gene Family AT4G35550 52.869 1.22e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste5g00306 Homeodomain 2.1e-18 CL0123