Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00294 TTAGGATCCACCTAAAGATTCCGACAGAAACATCTAAAAATTGGTCTCAACTTCCAAGTCTGCATTCAATTGAATTCAAAATTGAAAACGGAAATAAAAAAACTCATTGTGTGAATATGGCGATGGAAATGGAGCAGAATCAGAATCAGCAATTAGGGTTTCCCTTCTGGAAACCGCTTCGTCGCAGGTTCGGACCCGACTCTCCTTTCTTCGCTCCCGGCAACCTCGAACGCGAACTTCTTGCAAAACAGGTTGCTTTGGAGTTAACTGAAGAGAAGCAACAGCTTGAGAAATGGATGCAAGAGGAAGAAGGAAGGGAAGTCTTTTGTCCCATTGTTGGTTGTGGTGCACGCTTGACTTCAATGGAGGACTTTGAAAATCACTATAATGCAAGGCATACTGCATCCTGTTCTGTGTGTTCCAGAGTCTACCCAACATCCCGTTTGCTCAGCATACATGTATCTGAAGTACATGATTCTTTCTTTCAGGCAAAAGTTGCACGTGGTTATGATGTGTATGAATGCCTAGTGGAAAATTGTGGTTTGAAATTCAAAAGCTACGATAGTAGGCAGCAGCATCTGGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTTCAAAAAGGCCAAGCCTTCAAAGAAACAGAGGTTGAAATCCCTACGCAAACAAGCTATTCATAAGGAGGATGCTTCTGGAATGATGGAAGTGGAAAATGCAGCCATGGATGACCTTGTTTCAGCAGTCTCTAAATTGAGCACTTCTGATTCCACCCCTTCATCTATCAGCTTTGGTCGTCGCCACAAAGGCTTGTCATTTGTGCCTAGAGCTGTTCAGCGTGGAGGTGGATCAAACTCAACAACATCTGTGACAAAGAGATAATAAGCTTGCTATATGATCAATATTCAGATGCTGCTCCATTGTAAAATCTGTGCAGATGTCTTGTGTTCATAGTTT 956 0.4236 MAMEMEQNQNQQLGFPFWKPLRRRFGPDSPFFAPGNLERELLAKQVALELTEEKQQLEKWMQEEEGREVFCPIVGCGARLTSMEDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDVYECLVENCGLKFKSYDSRQQHLVDKHKFPTSFEFFKKAKPSKKQRLKSLRKQAIHKEDASGMMEVENAAMDDLVSAVSKLSTSDSTPSSISFGRRHKGLSFVPRAVQRGGGSNSTTSVTKR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00294 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
Pste5g00294 254 Coils Coil 43 67 - -
Pste5g00294 254 SMART c2h2final6 69 94 IPR013087 -
Pste5g00294 254 SMART c2h2final6 134 159 IPR013087 -
Pste5g00294 254 SMART c2h2final6 96 119 IPR013087 -
Pste5g00294 254 MobiDBLite consensus disorder prediction 240 254 - -
Pste5g00294 254 MobiDBLite consensus disorder prediction 234 254 - -
Pste5g00294 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Pste5g00294 254 PANTHER UNCHARACTERIZED 11 242 IPR039258 -
Pste5g00294 254 ProSitePatterns Zinc finger C2H2 type domain signature. 71 94 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00294 1 250 C2H2 Transcription Factor Family AT5G14140 62.835 1.92e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste5g00294 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00294 5 2003791 2006080 Pste5g00294 5 2003791 2006080 ECH