Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00284 TATGCTCCCAAACAGAAAACGCTGTGTTAAAATGTGCCCCACATGCAATGAGACAGGAGTTCTATGCAGCTTTCATTCAGTGATGACTGCCCATTTCTCGTGATGCCTACATGGGAAAGAATTTCATTCAAATTTCTCTCTCTCTCTCTGAGACATAAGAAAACACCTGGTCCGTGAACCCTGCGATAAAGCATTGAACTCTTTCTCTCTTTGCTTCTTCTCTCATTTCATCACTCACTGTTCACTGAAGAGTGAAGACGTTTTTCCTCTGCATTGCTACTGTCACTTTCTCTGTTGCCTCTGCGCTTATGTTTTCTTCTGCTACCATGGCTGTTGAAAGCTTCTAAAGGTTTTCCCTTGAAGTGATGTGCGCAGCAGCAGCTCGCTGAGCAAGAGACACAAGGGGATACTTGGTTCAAAACCCTCAAATTTAAGAAAAGGGAAAGTTCACTGTGAGGGAAATTAGGACTTTTTGGCCAAAAGAACAAGCAGCAAAAGTTTTTAATGATGTGGTACAGTGTTTGGTAGAGTTTTGATAGCAATTTTGGCTCTTGGAGAAGAACACTATTGAGTGGAGTGGAAACATTGACACTTCACTTCAACGGAGAAGAGGAAGGTGTACAGTGATGGAATTTGTATACTTGTTGCATATTCTGCTTGCTTGGTGTCTGTCAAGTTTTGAGCTTGTTGGTGCTGAGCTTCCGGACCAAGCTATATTACTTTCCATCAACCAAGAGCTTAGAGTCCCTGGATGGGGGGATGCCAACAACTCAGATTACTGCAGTTGGCAAGGTGTCAGCTGTGGTAACCACTCAATGGTGGAGGGCTTGGATCTGCCTCACCGGAATCTTCGAGGTAATGTTACTTTAATGTCTGAGCTCAAAGCCTTGAAGCGGCTTGATCTTTCAAATAATAATTTTGATGGATTGATTCCTCCTGCTTTTGGAAATTTATCTGATCTTGAACTTCTAGATTTGTCTTCAAATAAGTTTCAAGGTTCAATTCCACCTCAGTTGGGTGGTCTCACAAACCTCAAATCATTGAACCTTTCCAATAATGTGCTTGTGGGAGAAATACCAATGGAACTCCAGGCCTTAGAGAAATTGCAGGAACTTCAAATTTCTAGTAATCATTTGAGTGGTCTTATACCTTCTTGGGTGGGAAATTTAACCAATCTGAGACTTTTCACTGCTTATGAGAACCGTTTAGATGGCAGGATTCCAGATGATCTAGGCTCGATTTCTGAGCTTCAAATACTTAACCTTCACTCTAATCAGCTTGAAGGCCCAATACCAGCAAGCATTTTTGTTCCAGGAAAGCTGGAAGTTCTGGTTCTCACCCAGAATAATTTTAGTGGTGAACTTCCTAAGGAAATTGGCAATTGCAGAGTCCTTTCCAGTGTTCGAATTGGAAACAACCATCTAGTAGGTACTATTCCTAAGACCATTGGAAATCTTAGTAGCCTTACCTACTTTGAAGCTGATAATAATAATCTTTCTGGTGAGGTTGTGTCTGAGTTTGCTCAGTGTTCTAATCTTACCCTCCTGAATTTGGCTTCAAATGGATTTACTGGAACAATTCCACAAGACTTTGGACAGCTTATGAACCTTCAGGAATTAATTCTTTCTGGAAATAGCCTTTTCGGTGACATTCCAAAATCAATTTTAAGTTGCAAAAGTCTTAACAAGCTTGATATCAGCAACAACAGATTCAATGGGACAATACCAAATGAAATCTGCAATATCTCCCGGTTGCAGTACTTGCTGTTGGATCAGAATTTCATAAGAGGAGAGATCCCCCATGAAATTGGAAATTGTGCAAAACTCCTTGAATTACAATTGGGCAGTAACATTTTGACTGGAACTATTCCTCCTGAGATTGGTCGCATTAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGCACCACTGCCCCCAGAATTAGGGAAACTGGACAAACTTGTATCTTTGGATGTTTCAAACAATCAACTGTCAGGTAATATCCCACCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTGAACTTCTCAAATAATCTGTTACAGGGTCCTGTGCCAACATTTGTACCATTCCAGAAGAGTCCTAGTTCAAGCTTTTTGGGCAATAAAGGACTATGTGGAGAGCCTTTGAATTCTTCATGTGGAGACTCTTACGATGATCATAGTGCTTACCATCACAGAGTTTCTTACAGAATCATACTGGCTGTAATTGGTTCTGGTCTGGCTGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATCAGAGAGAGGCAGGAAAAAGTAGCCAAAGATGCCGGGATTGTTGATGATAGTGCCAATGACAACCTAACTATAATTGCAGGGAGTGTTTTTGTTGATAATCTAAGACAGGCAGTAGACCTTGATGCCGTCGTTAAAGCAACTCTGAAAGACAGTAACAAGCTCAGCAGTGGAACTTTCAGCACTGTTTACAAGGCAATCATGCCTTCTGGAGTGGTCTTATCTGTTAGGAGACTGAAGTCTGTAGACAAGACAATAATCCACCACCAGAACAAGATGATTAGAGAACTTGAAAGACTCAGCAAAGTTTGTCATGATAATCTTGTGCGTCCCATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCAAATGGAACATTGGCTCAGCTTCTTCACGAATCTACCAGGAAACCTGAATATCAGCCTGACTGGCCTTCCAGATTATCTATTGCCATTGGTGTGGCAGAAGGTTTGGCTTTCCTTCATCATGTGGCAATCATCCATCTTGATATTTCTTCTGGCAATGTTCTCTTGGATGCAAATTCCAAGCCATTGGTTGGGGAGATTGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATAAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGAATATGCATATACTATGCAAGTCACAGCACCAGGAAATGTTTATAGCTATGGTGTTGTGCTATTGGAGATCCTTACTACAAGACTACCAGTTGATGAGGATTTTGGTGAAGGTGTGGATTTGGTGAAATGGGTTCATAGTGCTCCAGTAAGAGGGGAGACTCCAGAGCAGATATTGGATGCGAGGCTTAGCACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCGTTGAAGGTTGCGTTGCTGTGCACCGACAATACTCCTGCCAAACGACCGAAAATGAAGAATGTTGTGGAAATGCTTCGAGAGATAAAACAAAATTGAGAACAGCAAGCCACTCAAGTATTCTATTCTGTGCTGTAAACTACACTGTTGAAGACTTGATGTATGCAAAACTCTCATGGATGCAGAGGAACTGATGAGTTACCACTTACAGAAACTTTAAATAGTAGACTTGTTTGAGGAATTATTTCATACGGTGAAGGTGGTGTGTCAAAGTAAATTCAGGCATTGATAGAACTTCACCTTTCTAGTTTGTCCAAAGGGTTAGTTGTGAAATAGCAGCTTATCTATTTGAGTTGGACGCTATGTTAGGTTGGGAAAGGATACATGCAAGAAGAAACCTTGAAAAGGGATATATATCAGTTCCTATTGCATATATGCTAGTCCGCACTTCTATTTACTCATCTGGGAGATGTATGCACCTATCAATCAATCTGTTCCCATTGAACTGAAAGTTCTAATTTATTTTTGTTGAGATAGGAGACTGTATATCTGAATTGTGCACATGCATGCCGTAGCTTCTACTGGACATGTTTTGTTGTTTTGACCGACATCACACAAACTTTCATTGCCAAAAATATTATTATGTCCCAACAAAATGGTCAAACCTCCGCACTAAAATAGTTTGAG 3878 0.4067 MEFVYLLHILLAWCLSSFELVGAELPDQAILLSINQELRVPGWGDANNSDYCSWQGVSCGNHSMVEGLDLPHRNLRGNVTLMSELKALKRLDLSNNNFDGLIPPAFGNLSDLELLDLSSNKFQGSIPPQLGGLTNLKSLNLSNNVLVGEIPMELQALEKLQELQISSNHLSGLIPSWVGNLTNLRLFTAYENRLDGRIPDDLGSISELQILNLHSNQLEGPIPASIFVPGKLEVLVLTQNNFSGELPKEIGNCRVLSSVRIGNNHLVGTIPKTIGNLSSLTYFEADNNNLSGEVVSEFAQCSNLTLLNLASNGFTGTIPQDFGQLMNLQELILSGNSLFGDIPKSILSCKSLNKLDISNNRFNGTIPNEICNISRLQYLLLDQNFIRGEIPHEIGNCAKLLELQLGSNILTGTIPPEIGRIRNLQIALNLSFNHLHAPLPPELGKLDKLVSLDVSNNQLSGNIPPELKGMLSLIEVNFSNNLLQGPVPTFVPFQKSPSSSFLGNKGLCGEPLNSSCGDSYDDHSAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMIRERQEKVAKDAGIVDDSANDNLTIIAGSVFVDNLRQAVDLDAVVKATLKDSNKLSSGTFSTVYKAIMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHNYFPNGTLAQLLHESTRKPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANSKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEDFGEGVDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIKQN 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00284 887 Gene3D Ribonuclease Inhibitor 229 519 IPR032675 -
Pste5g00284 887 Gene3D Ribonuclease Inhibitor 65 228 IPR032675 -
Pste5g00284 887 Gene3D Transferase(Phosphotransferase) domain 1 685 887 - -
Pste5g00284 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
Pste5g00284 887 ProSiteProfiles Protein kinase domain profile. 606 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00284 887 PRINTS Leucine-rich repeat signature 133 146 - -
Pste5g00284 887 PRINTS Leucine-rich repeat signature 88 101 - -
Pste5g00284 887 SUPERFAMILY Protein kinase-like (PK-like) 606 884 IPR011009 -
Pste5g00284 887 SUPERFAMILY L domain-like 47 293 - -
Pste5g00284 887 SMART LRR_typ_2 446 469 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 157 180 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 109 133 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 373 397 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 325 349 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 85 108 IPR003591 -
Pste5g00284 887 SMART LRR_typ_2 205 229 IPR003591 -
Pste5g00284 887 Gene3D Phosphorylase Kinase; domain 1 575 684 - -
Pste5g00284 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 685 887 - -
Pste5g00284 887 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 174 - -
Pste5g00284 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 576 684 - -
Pste5g00284 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 279 886 - -
Pste5g00284 887 ProSitePatterns Tyrosine protein kinases specific active-site signature. 729 741 IPR008266 GO:0004672|GO:0006468
Pste5g00284 887 Pfam Protein tyrosine and serine/threonine kinase 609 881 IPR001245 GO:0004672|GO:0006468
Pste5g00284 887 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Pste5g00284 887 Pfam Leucine rich repeat 327 384 IPR001611 GO:0005515
Pste5g00284 887 Pfam Leucine rich repeat N-terminal domain 41 59 IPR013210 -
Pste5g00284 887 SUPERFAMILY L domain-like 252 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00284 Pste-Chr5 1951356 1955772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00284 1 886 Receptor kinase-like Gene Family AT2G41820 72.666 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g00284 PK_Tyr_Ser-Thr 5.6e-27 CL0016