Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00283 CTGAAAAAATGTAAGGGAAGGTAGGTATTAGGTAACGTGCCATGCTAGTGTTCCACGCGGACTTTCATCACCTGAACAACGTTCTTCTTTTTCGTCTTCTTCAACAAAGGTAAAAAGTCTCCTCTTTCAACTTAGTTTATTCATTTGATCGAATACCCACCAAAAATTTCATTAGCCATACTATATGATCTAGCTCAAGATTCTCAATCATTATCCTTCAACCACTGTAATTCCCTTTCTCTCTTTTTAAATCTCTATTCTTTGTATCAATTCAAATCCAATTGATGTCATTATTGTTTGAATCACTCTAATTTGATGCCTTCTTCTATATGACCCTTTTGAATTGACAACCCAGTTTTGATTTTAGCCATAATATCATCACAAGGGTGAGAATTCTGTGTTGAGTCGAATGGATAATTATGGATCATCTCCTTCATATAGGTATCCAAACCCATATGGGTACCCTCCCAACCCTCATCAACCATACCCTCCTCCTCCAGCTCCAGCTCCTGACCCATATGCACATGTTCCTTATCCTCCATATCCCTACCTTACTTCACATTCCTTCAACTATTCCTATCCTCCACCTCCTAGATCTTCCCCACATTCTGGCCAATTTGAGTATTCTTACCCCCCTCCTAACCCTATGGACTTTCACCATCCTCCGCCATCTTATACTCATCCTCCTCCTTATCCTTATCCCTACCATGTTCCTCCACAAAATCATGCTTCTCCCAAGCCTTCCCATTCACACCATGCTAGTTTCCAACATGGATCACCTCCTTATTATTACCAACCAAATAAGCCCTATTCAGCTTCGGCTCCTGATGTCCATTGGCGTGCCAATAGCTTCTCTGCTCCCTACTGGCAGGATAACACAAGCACTGCAGGAGGTGAAGTGTCACAACCTAGTGATAACTCCAAGCCTTCTCAAGGTTCTGCTTACCCTCCTTTGGAGGATCTTATGAGCAATATTCGGTTATCTGATGGCCAGCCAACTGCTCCTGCATCACCACCTGCTCCTGCAGGGCAACCATTGATGCATTCCATCTCAGTTCCCAAGTTGCAACAGAAGAGAGAGGAGTTTTATGGATATTCAAATAACTCCTTCTCCGGGTGGGGATCCTCCTATCCCGACCGGATGGATTCCTCTAGACTTTCAGCTTTTTCTAGTTCATTTAATGAATCAGTATACAGTCAGAGTTTGCAGATTGTTCCAGTACAGAATAAAGGGTCCTTGAGAGTTTTTCTCCTGCATGGAAATTTAGATATATGGGTCCATGAAGCCAAGAATCTTCCAAATATGGACATGTTTCACAAAACATTAGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAGATTGAAGGAACTATGAATAAGAAGATTACTAGTGATCCTTATGTATCCATTTCAGTATCCAATGCAGTAATTGGGAGGACTTATGTCATTAGCAACTGTGAAAATCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAAGTACACTTTGTTGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCAAATATACTCGGGAGAAGTAGCTGAAGGAGCCTACCCTATCCTGAATAATAATGGGAAGCCTTGTAAACAAGGTGCTGTCCTGACCCTATCGATTCAGTACATACCTATGGGGAAACTCAGCATCTATCACCAAGGAGTTGGAGCAGGGCCTGAATACATTGGGGTTCCTGCCACATATTTTCCTTTGAGGAGAGGTGGAACTGTTACTCTGTATCAAGATGCTCATGTTCCAGATGGCAGCCTCCCTAACGTTTTACTTGACAATGGGATGTATTATGTGCATGGAAAGTGTTGGCAAGATATCTTTGATGCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTGTGGCATAAAGTAAAGCTGGTTAGGGACGCTGCTGGTTATGCTTCAGATTATACCCTGGGAGATCTTCTAAGGTCAAAATCACAAGAAGGACTGAGAGTACTTCTCCTTATCTGGGATGATCCTACATCAAGAAGCATTTTAGGTTATAAAACTGATGGTGTCATGGCAACTCATGATGAGGAAACTCGAAGATTTTTTAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGTAGTGGCAAGCGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACTCATCATCAGAAAACCGTTATTGTTGATGCTGATGCTGGAGATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTATGCGATGGACGATATGATACTCCCCATCATCCTCTTTTTAGAACATTGAATACGACACATAAGGATGACTACCACAACCCTACTTTCACGGGTAATGTTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCGAAGCCTCACGGAATCAAAAAGTTGAAAATTTCGTACGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATCAATGATGCTCCAAATGTTGGTGAAAATGATCCTGAAGTTTGGCATGTACAGATATTTCGTTCAATTGATTCAAACTCTGTTAAGAGGTTTCCCAAGGATCCAAAAGAGGCAACGAGCAAGAACCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTTAAGGCCATTCGTGCGGCACAACATTACATTTACATAGAGAATCAATATTTCATCGGTTCTTCATACAATTGGAGTCAGCATAAAGATCTTGGTGCTAATAATTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATAAAAGCAAATGAGAGATTTGCTGTGTATGTTGTTATTCCAATGTGGCCAGAAGGAGTTCCAACAGGGGCTGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAATGCTTTGGTTGAGGCAGGGCTTGAAGCAGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAAGCCATGAATTTGTATGATAATGTCAGTGTGACTGGAGCTCCTCCACCGGCAAATAGTCCACAAGCAGCCAGCCGAAATAGCCGTCGCTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCAATGGAAGGGACTAGGGACAGTGAGATTGCAATGGGAGCCTATCAACCTCATCATACGTGGGCAAGAAAACAATCTTATCCACATGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACAATTGAAGACTGCTTCTTGCAACCTGAGAGCCTTGAATGTGTAAGAAGGGTTAGAGTAATGGGTGAAATGAACTGGAAACAATTTTCAGCAAATGAAGTAACAGAGATGAAAGGGCATCTAATGAAATATCCTGTAGAAGTTGATCGAAAGGGTAAGGTTAGACCCCTCCCAGATCATGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAGGAGAATCTAACCATTTGATGAGTTGATTAGTTTCACATTCTGCTAGCCAATAGGATAAGATTTATGTAAATTAAAAAATAGAGACAATTTTGAAATGCATGATAGTTGAAGAAATAGATACCAACCCAAAATCCAATCAAATAAAGGCACCATACTAGTAAAGACCAAGTGAAGATGTATAGATACACCCAAGTTATATTGATCTTTCTCGTCCTTTGCAAACTTTGCAATCAATACTCAAATCGTTG 3936 0.4088 MDNYGSSPSYRYPNPYGYPPNPHQPYPPPPAPAPDPYAHVPYPPYPYLTSHSFNYSYPPPPRSSPHSGQFEYSYPPPNPMDFHHPPPSYTHPPPYPYPYHVPPQNHASPKPSHSHHASFQHGSPPYYYQPNKPYSASAPDVHWRANSFSAPYWQDNTSTAGGEVSQPSDNSKPSQGSAYPPLEDLMSNIRLSDGQPTAPASPPAPAGQPLMHSISVPKLQQKREEFYGYSNNSFSGWGSSYPDRMDSSRLSAFSSSFNESVYSQSLQIVPVQNKGSLRVFLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVSNAVIGRTYVISNCENPVWLQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEVAEGAYPILNNNGKPCKQGAVLTLSIQYIPMGKLSIYHQGVGAGPEYIGVPATYFPLRRGGTVTLYQDAHVPDGSLPNVLLDNGMYYVHGKCWQDIFDAISQARRLIYITGWSVWHKVKLVRDAAGYASDYTLGDLLRSKSQEGLRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGDNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTTHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDAPNVGENDPEVWHVQIFRSIDSNSVKRFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYNALVEAGLEAAFSPQDYLNFFCLGNREAMNLYDNVSVTGAPPPANSPQAASRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRVMGEMNWKQFSANEVTEMKGHLMKYPVEVDRKGKVRPLPDHEEFPDVGGKIVGSFLAMKENLTI 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00283 1098 SMART pld_4 609 644 IPR001736 GO:0003824
Pste5g00283 1098 SMART pld_4 944 971 IPR001736 GO:0003824
Pste5g00283 1098 MobiDBLite consensus disorder prediction 13 34 - -
Pste5g00283 1098 Gene3D Endonuclease Chain A 753 999 - -
Pste5g00283 1098 FunFam Phospholipase D delta 485 723 - -
Pste5g00283 1098 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 944 971 IPR001736 GO:0003824
Pste5g00283 1098 MobiDBLite consensus disorder prediction 1 34 - -
Pste5g00283 1098 Pfam C2 domain 284 410 IPR000008 -
Pste5g00283 1098 SUPERFAMILY Phospholipase D/nuclease 790 1030 - -
Pste5g00283 1098 SUPERFAMILY Phospholipase D/nuclease 478 709 - -
Pste5g00283 1098 ProSiteProfiles C2 domain profile. 262 408 IPR000008 -
Pste5g00283 1098 Gene3D C2 domain 280 422 IPR035892 -
Pste5g00283 1098 Pfam Phospholipase D Active site motif 610 644 IPR001736 GO:0003824
Pste5g00283 1098 Pfam Phospholipase D Active site motif 945 971 IPR001736 GO:0003824
Pste5g00283 1098 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 609 644 IPR001736 GO:0003824
Pste5g00283 1098 FunFam Phospholipase D 757 990 - -
Pste5g00283 1098 MobiDBLite consensus disorder prediction 78 105 - -
Pste5g00283 1098 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 432 IPR035892 -
Pste5g00283 1098 MobiDBLite consensus disorder prediction 58 126 - -
Pste5g00283 1098 PANTHER PHOSPHOLIPASE D 274 1089 IPR015679 -
Pste5g00283 1098 CDD C2_plant_PLD 279 431 - -
Pste5g00283 1098 SMART C2_3c 285 407 IPR000008 -
Pste5g00283 1098 Gene3D Endonuclease Chain A 487 723 - -
Pste5g00283 1098 MobiDBLite consensus disorder prediction 154 211 - -
Pste5g00283 1098 Pfam Phospholipase D C terminal 1018 1088 IPR024632 -
Pste5g00283 1098 FunFam Phospholipase D delta 279 426 - -
Pste5g00283 1098 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00283 Pste-Chr5 1939836 1952236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00283 63 1098 Phospholipase D Gene Family (Wang group) AT2G42010 69.850 0.0 1476