Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00270 CACAATCATCACAATTCACAAGTCAAGTCACAACCTCAAACTTGTATCCCATTTCTACTCTTTCCCAAAAGAACATGGCAGAATCATTTGTCTTCGATATTGCTGAATCACTGTTGGGGAAGCTTGCATCTTATGCTTATGAAGAAGCTTCCAGAGTGTACGGTGTGTATGAGGATCTTCAACGGATGAAAGACACATTGTCAATTGTGAAAGGTGTGCTGTTGGACGCTGAGGAGAAGAAGGAGCACAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAATGTATGCTTGGATGCTGAAGATGTCTTGGATGGATTTGAGTGCCAAAAGTCACGTAAACAAGTAGTCAACGCTTCAGGTAGCATCAGGGTGAAGGTAGGCCACTTTTTTTCATCTTCTAATTCTCTTGTTTTCCGTCATAGGATAGCTCATCAAATCAAAGATATTAGGGAAAGATTGGATAAGATAGCTGCTGATGGGAACATGTTTGGTCTTGAGAGGATTGATGTTCTCCACAGACTTGTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGATGTGCTACAAAGTCGTCTTAGACACAAGCTTTCTGGGCAGAAATTTTTGTTAGTCTTGGATGATATATGGAATGATGATTATGCAAAATGGATTGAGTTGAAAAATTTGATAAAAGTTGGTGCAGTGGGAGGCAAAATCATAGTGACAACAAGAAGCAACTCAATTGCTTCGATGATGGGCTCTGTTCCACCTTATATTTTAGAGGGCCTTTCTCCTGAGAATTGTTTATCCCTGTTTGTGAGATGGGCATTTAAGGAAGGTCAAGAGAAGCAGTATCCAAATTTAATGGAGATCGCAGAGGAAATTGTGAGAAAATGCCGAGGGGTTCCTTTGGCAGTAGAGAATATTGCCAGACAATATATAGAAGAGTTGCTTTCAAGATCATTTCTGCAGGATTTCACAGATTTTGGCCTCTTCTATTTTTTCCACGTACATGATTTGGTGCATGATCTTGCGCTATATGTTGCGAAAGAGGAGTATCAGATGGTAGATGCCCGTACACGGAACATACCTGAGCAAGTACGGCACTTATCAATTGTTGAAAATGATTCAGTTGATCATGCTTTGTTCCCCAAATCCAGAAGCGTGAGAACAATTATTTTTCCCATTGAAGGAATGGGTCTTGCCAGTGAAACTCTCTTGGAGACATGGTTATCAAGATACAGATACTTACGGGTTTTAGATTTAAGTGATTCTTCTTTTGAGACTCTGCCTAGTTCAATTGCTAAGTTGGAGCATCTGCGAGTTCTCGATCTTTCTAATAACCCCAATATAAAAAGACTTCCTCTTTCTATTTGCAAGCTGCAGAATTTGCAAGTTTTTTCAGTGAGTGGATGCAAGAAGCTTCAAAGATTTCCTAAAGGATTTGGGAAGTTGATCAACCTTCGAGAACTGAAAATAACCACAAAGCAATCTTTTCTGTCGCAGAATGAATTTTCAAGTTTGATAAATCTTCAAACATTGAGTTTTGAATATTGTGACAATTTGAAGTTTTCGTTTGAAAGGACAGAACTCAGTTCTCTTCAAATATTGGTTATCCGATCATGTGGGAGCTTGAAGTCATTACCTCTTCATATTCTCCCTAAACTAGAGGCTCTGTTTGTTGCGGACTGTGAGATGTTAAATTTGTCGGACGACGAAAGCCCCATTCAAAGATTGAGGATGAAATTTCTGCACGTAGAGAATTTTCCACAGCTAACCAGATTTCCTGAATGGATCGAAGGGGCTGTCGATACTTTACAGACCTTGATGATTTATAATTTGCCCAAAGTTTCAATGCTTCCTGACTGTTTACCTAGAATGACTCATCTTAAGAGGCTCCATGTTGCAGAATGTAGATGGTTGTGCTTTCCTCATAGTCACATGCAACACCTCACTACCATCGAAGATTTGAGTATAGATGGTTGTCCTGCATGGGATTTTTTAATAAATAACACTCAT 2012 0.3966 MAESFVFDIAESLLGKLASYAYEEASRVYGVYEDLQRMKDTLSIVKGVLLDAEEKKEHKHGLREWLRQIQNVCLDAEDVLDGFECQKSRKQVVNASGSIRVKVGHFFSSSNSLVFRHRIAHQIKDIRERLDKIAADGNMFGLERIDVLHRLVQRREMTYSHVDASDVLQSRLRHKLSGQKFLLVLDDIWNDDYAKWIELKNLIKVGAVGGKIIVTTRSNSIASMMGSVPPYILEGLSPENCLSLFVRWAFKEGQEKQYPNLMEIAEEIVRKCRGVPLAVENIARQYIEELLSRSFLQDFTDFGLFYFFHVHDLVHDLALYVAKEEYQMVDARTRNIPEQVRHLSIVENDSVDHALFPKSRSVRTIIFPIEGMGLASETLLETWLSRYRYLRVLDLSDSSFETLPSSIAKLEHLRVLDLSNNPNIKRLPLSICKLQNLQVFSVSGCKKLQRFPKGFGKLINLRELKITTKQSFLSQNEFSSLINLQTLSFEYCDNLKFSFERTELSSLQILVIRSCGSLKSLPLHILPKLEALFVADCEMLNLSDDESPIQRLRMKFLHVENFPQLTRFPEWIEGAVDTLQTLMIYNLPKVSMLPDCLPRMTHLKRLHVAECRWLCFPHSHMQHLTTIEDLSIDGCPAWDFLINNTH 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00270 646 Pfam Rx N-terminal domain 11 103 IPR041118 -
Pste5g00270 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 287 IPR027417 -
Pste5g00270 646 Pfam NB-ARC domain 152 283 IPR002182 GO:0043531
Pste5g00270 646 SUPERFAMILY L domain-like 310 639 - -
Pste5g00270 646 Gene3D - 235 289 IPR042197 -
Pste5g00270 646 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 162 288 IPR039203 GO:0050832
Pste5g00270 646 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Pste5g00270 646 CDD RX-CC_like 2 134 IPR038005 -
Pste5g00270 646 Gene3D - 10 124 - -
Pste5g00270 646 PRINTS Disease resistance protein signature 175 189 - -
Pste5g00270 646 PRINTS Disease resistance protein signature 272 286 - -
Pste5g00270 646 PRINTS Disease resistance protein signature 408 424 - -
Pste5g00270 646 Gene3D Ribonuclease Inhibitor 327 644 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00270 Pste-Chr5 1872957 1875553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00270 390 536 Miscellaneous Gene Families AT4G39270 34.868 5.99e-09 57.4