Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00229 CATTCCGTTCCATTCCACACTCCCACCTTCTCAAATTCCAATCACACGTACACTTCTCTTTCTCTCTCCTACGGTTAGGGTTAGGGTTGGGTTAGGTTAGGGTTAGGGTTTGCTTCGATCATGGCCTCGTCTTCCTCCGATCCCGGAAAGTCGGCGGAGACGTCGGAGGCGGCGGTGGCGGTGGCCAACGATCAGCTCTTGCTGTACAGAGGATTGAAGAAAGCCAAGAAGGAGAGAGGTTGCACCGCCAAAGAGCGCATCAGCAAAATGCCTCCCTGCGCCGCCGGAAAACGCAGCTCCATTTACCGCGGCGTCACAAGGCATAGGTGGACAGGTCGTTATGAAGCGCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGGGGCGTATGATGACGAGGAAGCAGCGGCTAGAGCATATGACCTTGCAGCTCTTAAATATTGGGGTCCTGGTACTCTCATTAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCGAGAGAAGAGTATCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCGAGAGGACTTTCAAAATATAGGGGACTGTCCAGTTCTTCTCTGCTTTGCTACACGGCTACAGATTTTAGTGTAGCTGTCATCCAGTGCATAACTTCAGATGTGGATTTGACTACTAACTTAAACTCTTCAATTCACTTTGCATGTGGTGCTACCAAAATTAGTCGATGGGAGTCATATGGCCGTATGTCTGGATCTGATTACTTCAATAGCATGCATTATGGTGCAGGGGATGATTCTGCAGCAGAAAGTGAATATGTAAGTGGTTTCTGCATAGAAAGAAAGATTGATTTGACTAGTCACATCAAATGGTGGGGAACTAATAAGACTCGACATTCTGATGCTGGATCAAGATTATCAGAAGAAAAGAAACTTGGTTCTGCTGGAGATATTTGCAGTGAACTTAAGCAATTGGAACAGAAAGTTCAACCTACAGAACCTTACCAGATGCCACAGTTAGGCAGGCCACACAATGAGAAAAAGCATAGAAGTTCTTCAGTCTCTGCCTTAAGTATCTTGTCACAATCTTCTGCCTACAAGAGCTTGCAAGAGAAAGCGTCAAAGAAACAGGAAATTAGCATTGATAATGATGAGAATGAAAACAAAAATACTGTCAACAAGTTGGATCATGGCAAGGCAGTTGAGAAACCTTCAAATCACGATGGTAGCAATGATGGGCTTGACATTGCAATGGGAATGAGTGGTACAATGTCTCTTCAAAGAAATGTTTACCCATTCACACCATTCTTGTCTGCGCCACTTTTGACAGGCTATAATACTGTTGATCCATTGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCCATACTTCCTGCTGGCCTTTCTCGTACAGCTGAGGTCGGTGCAATAAATTTACTTTCTTTTGGATGA 1473 0.446 MASSSSDPGKSAETSEAAVAVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSSSLLCYTATDFSVAVIQCITSDVDLTTNLNSSIHFACGATKISRWESYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGTNKTRHSDAGSRLSEEKKLGSAGDICSELKQLEQKVQPTEPYQMPQLGRPHNEKKHRSSSVSALSILSQSSAYKSLQEKASKKQEISIDNDENENKNTVNKLDHGKAVEKPSNHDGSNDGLDIAMGMSGTMSLQRNVYPFTPFLSAPLLTGYNTVDPLVDPVLWTSLVPILPAGLSRTAEVGAINLLSFG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00229 450 MobiDBLite consensus disorder prediction 338 376 - -
Pste5g00229 450 FunFam AP2-like ethylene-responsive transcription factor 60 126 - -
Pste5g00229 450 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Pste5g00229 450 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Pste5g00229 450 Gene3D AP2/ERF domain 61 126 IPR036955 GO:0003700|GO:0006355
Pste5g00229 450 ProSiteProfiles AP2/ERF domain profile. 61 124 IPR001471 GO:0003700|GO:0006355
Pste5g00229 450 MobiDBLite consensus disorder prediction 295 321 - -
Pste5g00229 450 MobiDBLite consensus disorder prediction 338 379 - -
Pste5g00229 450 Pfam AP2 domain 61 116 IPR001471 GO:0003700|GO:0006355
Pste5g00229 450 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 340 - -
Pste5g00229 450 SMART rav1_2 61 130 IPR001471 GO:0003700|GO:0006355
Pste5g00229 450 SUPERFAMILY DNA-binding domain 60 125 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00229 Pste-Chr5 1638237 1640888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00229 19 441 AP2-EREBP Transcription Factor Family AT2G41710 58.525 6.00e-154 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste5g00229 AP2 2.3e-09 CL0081