Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00213 ATGGCTTTACAGAACATTGGTGCTGCTAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACTAAAATTGAGGGCAGAGGCAATGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCAAAGGCATTGGCAAGGCCTGCGTCTTACACAACTAAATATTTTGGTTGTGAGCTTGGGGCCCAATCCAAGTTTGATGAGAAGACTGGCACTTCTCATGTCAATGGAGCACATGATACTGCCAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTTCAGTGTTATGGTTGCGGAAATCCTGAAACCGAGATCATAATTACTAAGAACCAAATGATCCAGCTCAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCGGAAGTTAAGAAAGGGTCCAAAGACAAGAAGGCCATGCGGAGAGCTGAGAAAGAGAGATTGAAGGAAGGTGAACTTGCTGATGAGGAGCAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGTTCTTCAAAGGATGTCACTGGTAAATCCACCTCTTCAAAGAAAAAAGCAAGTGGCTCTGATGAAGACCGCACATCACCTACTCACAGTCAAATTGATGAGAAAGAGGAGGCTCCAGATGAAGATGATGATGATGTGCAATGGCAGACAGATACATCTCTTGATGCTGCCCGTCAACGTATCCAAGAACAGTTGAGTGCTGTAACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAGAAAAAAGCAGCAAGTAATGGAAATGGGGGTTCTCAGAATGGTAACTCCACGCCTTATGGAACCCTGGTTGGTGAAGTGAAAGCAAATTTGAAGAAAGGTTTTGGAGCAAATGAATTGCTGTCCCATCTTGCCGCACTTCCTGTACCTGCTCAAGAAAAAATGAGTGCTCTGGTTGAAGCTCTGTTCGAGGGAACAGAGAAAGGTTTTGCTAAAGAAGCTGATAAGAAGAAGAACTACTTTGCTGCTGCTGTTGCTGAGGAGGGATCCCAGTTGTTATTGCTTCATTCTATTGAGGAATTTTCTTGCAAGTCTAATTCCAATGCTTTGAAGGAGGTTGCCCTGGTTCTGAAGGCTCTCTATGATGCCGATGTGTTGGAGGAAGAGCACGTAGTGCAGTGGTATCAAAAGGGACTTTTGGGAGATAACAAGAACTCTAAGATTTGGAAGAATGCTCAACCTTTTATTGATTGGCTTAAGAATGCCGAATCAGAAAGCGAGGAAGAATAA 1317 0.4267 MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEEQKKVKKEVKKKGSSKDVTGKSTSSKKKASGSDEDRTSPTHSQIDEKEEAPDEDDDDVQWQTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKKAASNGNGGSQNGNSTPYGTLVGEVKANLKKGFGANELLSHLAALPVPAQEKMSALVEALFEGTEKGFAKEADKKKNYFAAAVAEEGSQLLLLHSIEEFSCKSNSNALKEVALVLKALYDADVLEEEHVVQWYQKGLLGDNKNSKIWKNAQPFIDWLKNAESESEEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00213 438 CDD W2_eIF5 288 436 - -
Pste5g00213 438 MobiDBLite consensus disorder prediction 147 233 - -
Pste5g00213 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pste5g00213 438 Gene3D - 105 145 - -
Pste5g00213 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Pste5g00213 438 MobiDBLite consensus disorder prediction 148 222 - -
Pste5g00213 438 SMART 542_3 347 434 IPR003307 GO:0005515
Pste5g00213 438 Gene3D - 283 429 - -
Pste5g00213 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pste5g00213 438 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Pste5g00213 438 Gene3D - 2 104 - -
Pste5g00213 438 SUPERFAMILY ARM repeat 286 432 IPR016024 -
Pste5g00213 438 FunFam Eukaryotic translation initiation factor 5 285 429 - -
Pste5g00213 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 437 IPR045196 GO:0003743|GO:0006413
Pste5g00213 438 MobiDBLite consensus disorder prediction 266 289 - -
Pste5g00213 438 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Pste5g00213 438 ProSiteProfiles W2 domain profile. 279 438 IPR003307 GO:0005515
Pste5g00213 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Pste5g00213 438 MobiDBLite consensus disorder prediction 275 289 - -
Pste5g00213 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00213 Pste-Chr5 1585332 1586648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00213 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 63.616 0.0 518