Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00209 ATTTACTTTTTCCGTTTGGTTATTATCAACCTCCACTTGCTCTCACTCTACCAAAATTGCGATTCCAACGTCCAAGAGTACACTGCACACTGTTCGTTCTTTCATCTCAGAACTACAACTGCGTCGCGTCTGCTTCTAGGGTTTCGCAGCCATGGGAGCTGCGTGGAGGCAGTTGAAGGTTATGCTCCGCAAGAACTCACTCCTCAAGATTCGTCACCCTTTCACCACTGCCGCTGAGATTTTGCTCCCTACGATTGTGTTGTTGCTGTTAGTAGCTATAAGGACAAAAGAAGATACACAAATTCATCAAGCTCAACCGCACATTCAAAAAGATATGTTTGTGGAAGTGGGCAAAGGTATTTCCCCAAACTTGCAACAAGTTTTGCAATCGTTGTTGGATGGGGGAGAGTATTTAGCTTTTGTACCTGATACAAATGAGACAAAGCTGTTGATAGATGTAGGATCAATAAAATTTCCACTCTTGAAGCTAGTTAGTAGAGTATACAAAGATGAGGAAGAGTTGGAAACCTACATCCGCTCAGATTCTTATGGCACCTGCAATCATGCTAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTGTTTCATGAACAAGGCCCTCAGTCATTTGATTATAGCATACGCCTGAATCATACATGGGCTTTCTCTGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTCCTGTACCAACTATGCAATACAGCTTCAGTGGGTTTTTGACTCTTCAGCAAATGGTTGATTCATTCATAATATTAATAGCGCAGCAGTCTGGGTTAAATTTCAATGCTGAAAGTCTAGAGCTTCTTCCAGGCTTCTATGACACTAATTTCTCTTCGAAAAATCCATGGACTCATTTTAATCCTTCTCACATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTTCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTGTTGGGGTTTCTCTATCCAGTTTCTCGCCTAATTAGTTATTCTGTGTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGTATATTTCATCTTTCTTGGTTTATCACTTATGCTTTGCAGTTTGCAATTTCTTCTGGGATCCTTACAACTTGTACCATGAATAATTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTTTTCGTTTTTGGGCTTAGTGCAATCATGCTGTCATTCTTTATATCAACGTTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTCTATCTTTTCTTGGAGCGTTTTTCCCTTATTACACTGTCAATGATGAGGGAATTTCAATAGTCTTGAAGGTTATTGCTTCTTTGCTTTCACCTACTGCCTTTGCATTGGGTTCGATCAACTTTGCCGATTATGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGGGAATCATCTGGAGTGAACTTTTTGGCATGTCTTCTCATGATGATACTTGACACTGTACTATATTGTGCGATTGGACTTTATTTTGACAAGGTTCTTCCAAGAGAGTATGGAAAGAGATATCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAAGAAAGAAATTGTAAAACATTGTTCCTCCGGTTTTAAAGTTAAAATATCTGATAAGAATTCTGAGTCAGAAGGGAATCTTTCAGGGGAATATACTTCCAAATCTACCATAGAACCAATAAGCTTAGACATGAAACAACAAGAGCTTGATGGCAGGTGCATTCAAATGAGGAATTTACATAAAGTGTATGCTACAAAGAAAGGAGATTGTTGTGCTGTGAACTCATTACAGCTGACACTGTATGAAAACCAGATTCTTGCCCTTCTAGGACATAATGGAGCTGGGAAAAGCACAACAATCTCAATGCTTGTGGGTCTGATTCCTCCTACTTCTGGGGATGCTTTGGATGAGATACGGAAGTTTTTGGGTGTCTGCCCACAACATGATATACTGTTTCCTGAATTAACAGTTAAAGAGCATTTAGAACTGTTTGCCATATTAAAGGGTGTGGAGGAACACTCATTGGACAATGCTGTTATTAATATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACAGTATTGTGAGAACTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATTATCCTTGATGAACCTACTAGTGGAATGGATCCATATTCAATGCGCTTGACTTGGCAGTTAATTAAAAAAATTAAGAAGGGCAGGATAATTTTGCTTACTACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGGATAGCTATTATGGCCAATGGTTCTCTGAAATGTTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTCGGTTATACTCTGACTCTTGTGAAGTCTGCCCCTACTCCTTCTATAGCTGGTGATATCGTATACCGTCATGTTCCATTTGCAACATGTGTAAGCGAGGTTGGAACTGAAATTTCTTTCAGGCTTCCAATGGCATCCTCATCAGCCTTTGAGGGGTTGTTTAGGGAAATTGAAGGTTGCATGAAGAAACCACTTTTGAATATGGAATTGGGTGGGAATGGTGACAAAGACAGTCTTGGTATTGAAAGCTATGGTATATCAGTAACAACATTGGAGGAGGTATTTTTGCGAGTTGCAGGATGTGACTATGATGAAGTGGAATGCTTTGAAGAAAATAGCCATTCTCATATATCAGACTCCATGGCTTCTCTTCCGACTAATGATCATCTGTCCACAAAAATAAGTTGTCTTAAATTTTTTAGAAATTATAAGAATATTTTTGGTTTCATTTGTACCTTGTTGGGAAGAGCCTGTGGCTTAATTTTCGCTACAATTATTAGTTTTATCAACTTCTTGGGTATGCAGTGCTGTAGCTGCTGTTTCATTACTAGGTCAACATTTTGGCAACATTCTAAAGCCTTATTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTACTGATTCCTACTCTCTTCTTGTTTATTGGTCTTCTATTTCTGAAGCTCAAGCCACATCCTGATCAGCAATCACTGACCCTTTCAACTTCTCATTTTAATCCTCTATTGAGTGGTGGGGGAGGGGGAGGTCCAATTCCCTTTAATCTATCTTTGCCAATTGCTGAAAAGGTAGCACAAAATGTCATAGGAGGGTGGATTCAGGGGTTGAAGCCAAGCTTATACAAATTCCCTAATCCAGAAAAGGCTTTGGCTGATGCAGTGGAAGCTGCAGGGCCAACTTTGGGTCCTTCTCTACTTTCGATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAATAATGATGGAAGTTTAGGATACACTGTATTACACAACTGTTCTTGTCAACATGCTGCTCCTACTTTTATCAATTTGATGAATTCTGCAATTCTCAGGCTGGCAACTCATGACACAAATATGACAATTCAGGCACGCAACCACCCTCTACCAACAACACAAAGCCAACGCCGACAACGTCATGACCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCTTTCTCTTTCATACCTGCCTCATTTGCTGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCTGTCCTGTCATATTGGACTTCTACATATATTTGGGACTTTGTGAGCTTCTTGTTTCCGGCCTCTCTTGCCATAGTTCTCTTTTACATCTTTGGTCTTGATCAGTTTGTTGGAGGGTTTTCTTTGTTACCAACAATCCTCATGCTTTTGGAATATGGACTTGCAATTGCGTCATCAACTTACTGCCTTACATTTTTCTTTTTCGACCATACCATGGCTCAGAATGTGGTTCTCCTGATCCACTTTTTCACTGGATTGATACTAATGGTTATATCATTCGTAATGGGACTCATGCCATCAACCATGAGTGCTAATTCTTTTCTTAAGAATTTTTTCAGAATATCGCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGCTCTTTTGAGGCAAGGAATGAAAGACAAAACAAGTAATGGGGTGTATGATTGGAATGTTACTGGTGCTTCCATCTGTTATCTTGCTGTTGAGAGTTTTAGTTACTTTCTGTTGACACTTGCACTTGAAATTTTTCCTTCTCTCAAATTGACTTCATTCATGATCAAGAATTGGTGGGGAAAAATTAATATCTTCCGTCATGATACTGCTTATTTGCAACCTTTGTTAGAAACGTCCTCTGAAACTGTTGCTATGGACTTTGACGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGACAATCCCATTATCTACCTGCGTAATCTTCGTAAGGTATATTTTGAGGAGAAGCATCATGGCAAAAAGGTTGCTGTAGATTCATTAACTTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTATGTGGGGATGAATCTCCTTCTGACGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCAAAGGCTGCTCGTCAATATATTGGATACTGTCCACAATTCGATGCTCTATTGGAATACTTAACTGTCCAAGAGCATCTTGAGCTTTATGCTAGAATAAAACGTGTTCCAGAATTTTCAGTAGAAAATGTTGTTAGGGAAAAGTTAGCAGAGTTTGACTTGTTGAAGCATGCCAATAAGCCATCATTTACACTTAGTGGAGGGAATAAAAGAAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAGCCGTCCACAGGCATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACAAGGAAAGACTGCAGTAATTCTTACTACACACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTACGATGCATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTTAAACCTACTGAAGTGAGTTCTGTGGACTTGCAAACTCTCTGCCAAGCTATACAAGAAAGACTTCTTGATGTCCCTTCTCATCCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGAGGTACTAACTCCGTCACATCAGGAAGTACCTCCATTGCTGAGATTAGCTTGACACGAGAAATGATAGGCTTAATTGGGCGCTGGCTTGACAATGAAGAAAGAGTAAGGGCACTAATCTCTTACACACCTGTCTGTGATGGATCTACTCAGGAACAATTATCAGAACAACTGTTTCGTGATGGTGGCATTCCATTGCTTGTATTTTCTGAGTGGTGGCTTTCTAAACAAAAATTCTCAGAAATCGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAAGGGTGCAATGGATTGAGCATCAGATATCAGAAACAGATTAGGGATTGTGGAGTACAGCATCAGCCAATCAACTCTTGAGACCATATTTAATCATTTTGCGGCTATTCCATGAGGTGTCTTCATTTTACAATTCGTTATAGTTATTTAAATTCTTCAAAATGATGACATTCTTTCACTTCTCCGCTTGAATTAAACATAGGGCCTTGTGCGAGATTCTAAGGCCTTGTACATTCGATAATTACAGTGACATGGAATTGTAAATAGAAAAAGATGTAAACACGAATATATTTAATATATTTTGGAAACTAAATTTTGGAAGTTTAGGGTTGTGATTTTTCAATATTATCCTTCAATAAAAAAGCCTTACATCCTTGCCCA 6004 0.3922 MGAAWRQLKVMLRKNSLLKIRHPFTTAAEILLPTIVLLLLVAIRTKEDTQIHQAQPHIQKDMFVEVGKGISPNLQQVLQSLLDGGEYLAFVPDTNETKLLIDVGSIKFPLLKLVSRVYKDEEELETYIRSDSYGTCNHARNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSPVPTMQYSFSGFLTLQQMVDSFIILIAQQSGLNFNAESLELLPGFYDTNFSSKNPWTHFNPSHIRIAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSGILTTCTMNNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGISIVLKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTVLYCAIGLYFDKVLPREYGKRYPWSFIFQKDFWRKKEIVKHCSSGFKVKISDKNSESEGNLSGEYTSKSTIEPISLDMKQQELDGRCIQMRNLHKVYATKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTSGDALDEIRKFLGVCPQHDILFPELTVKEHLELFAILKGVEEHSLDNAVINMADEVGLADKINSIVRTLSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTPSIAGDIVYRHVPFATCVSEVGTEISFRLPMASSSAFEGLFREIEGCMKKPLLNMELGGNGDKDSLGIESYGISVTTLEEVFLRVAGCDYDEVECFEENSHSHISDSMASLPTNDHLSTKISCLKFFRNYKNIFGFICTLLGRACGLIFATIISFINFLGMQCCSCCFITRSTFWQHSKALFIKRAISARRDHKTIIFQLLIPTLFLFIGLLFLKLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSLPIAEKVAQNVIGGWIQGLKPSLYKFPNPEKALADAVEAAGPTLGPSLLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNCSCQHAAPTFINLMNSAILRLATHDTNMTIQARNHPLPTTQSQRRQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSVLSYWTSTYIWDFVSFLFPASLAIVLFYIFGLDQFVGGFSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFVMGLMPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSNGVYDWNVTGASICYLAVESFSYFLLTLALEIFPSLKLTSFMIKNWWGKINIFRHDTAYLQPLLETSSETVAMDFDEDVDVKTERNRVLSGSLDNPIIYLRNLRKVYFEEKHHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGDESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEYLTVQEHLELYARIKRVPEFSVENVVREKLAEFDLLKHANKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQAIQERLLDVPSHPRSLLNDLEICIGGTNSVTSGSTSIAEISLTREMIGLIGRWLDNEERVRALISYTPVCDGSTQEQLSEQLFRDGGIPLLVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQKQIRDCGVQHQPINS 1850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00209 1850 Pfam ABC transporter 1475 1617 IPR003439 GO:0005524
Pste5g00209 1850 CDD ABC_subfamily_A 559 770 - -
Pste5g00209 1850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1451 1682 IPR027417 -
Pste5g00209 1850 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 559 782 IPR003439 GO:0005524
Pste5g00209 1850 ProSitePatterns ABC transporters family signature. 684 698 IPR017871 GO:0005524|GO:0016887
Pste5g00209 1850 FunFam ATP-binding cassette sub-family A member 12 551 786 - -
Pste5g00209 1850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 772 IPR027417 -
Pste5g00209 1850 ProSitePatterns ABC transporters family signature. 1590 1604 IPR017871 GO:0005524|GO:0016887
Pste5g00209 1850 FunFam ABC transporter A family member 1 1442 1696 - -
Pste5g00209 1850 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1453 1691 IPR003439 GO:0005524
Pste5g00209 1850 SMART AAA_5 587 759 IPR003593 GO:0016887
Pste5g00209 1850 SMART AAA_5 1483 1670 IPR003593 GO:0016887
Pste5g00209 1850 CDD ABC_subfamily_A 1453 1679 - -
Pste5g00209 1850 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 977 1389 IPR026082 GO:0016020|GO:0055085|GO:0140359
Pste5g00209 1850 Gene3D - 546 784 IPR027417 -
Pste5g00209 1850 Gene3D - 1446 1695 IPR027417 -
Pste5g00209 1850 Pfam ABC transporter 579 712 IPR003439 GO:0005524
Pste5g00209 1850 Pfam ABC-2 family transporter protein 224 480 IPR013525 GO:0016020|GO:0140359
Pste5g00209 1850 Pfam ABC-2 family transporter protein 981 1383 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00209 Pste-Chr5 1565069 1611094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00209 559 785 Calmodulin-binding Proteins AT2G36910 24.800 2.09e-14 77.4