Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00208 AAAACGAGTCGCATAACACAAGTGTCACAAGGTATATTCGACGCCCTCACAATCCACTCTGGTGCTTTCTTTATCACACGAACAAAACCATATTCTGCAGCTGCAGCAGCAGCACGTGCACGGTGCAACCCATCGAAACGACGCCGAAACTTCAAAACGACGATGCCGGAGGAAACGACTTCGATCGACTACGGCCCCACTTCTCCGGCCTCCGACTCGACGGCCTCCTTCCGCTGTCCCCACTCACGACCCAACCCTAACCCCGATTCCTTCCCCAATCAACCCTTCGTCATTGGTGTTTCTGGAGGCACTGCGTCGGGGAAAACCACCGTGTGCGACATGATCATTCAGCAGCTCCACGATCACCGCGTCGTTCTCGACTCGTTTTATCGTGGGTTGAGACCTGAAGAGATGGAGCGTGTTCACGAGTACAATTTCGATCACCCTGAGTGCATGAGGAAGCTCATCAGTGGCCAGGGTGTGCATGTTCCCATTTATGACTTCAAGAAGCACCAACGTTCTTCTGATAGTTTTCGCCAGGTAAATGCCTCTGATGTGATTATATTGGAGGGAATTCTTGTCTTCCATGATCAGGGTGTGCGAGAGCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAGATGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTATGCTGACGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTACAACATATCCGTACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAGTCTACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAGAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTTATTCGTCTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTCACTGAAAAGCAAGTGGTTACTCCCACAGGATCTGTATATACTGGTGTTGATTTCTGTAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCTTGTTGTAAAGGCATTAAAATTGGTAAAATTCTGATTCATCGGGATGGAGACAATGGAAAACAGCTTATATATGAAAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGACCCGGTCCTGGCCACAGGTAACTCTGCCAACCAAGCAATTGAATTACTCATTAAGAAAGGAGTACCAGAAAATCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGAATCCACTGCGTGTCTAAAAGGTTTCCATCATTGAAGATTGTCACATCTGAGATTGATGTTGAATTAAATGAAGAGTACCGTGTTATCCCCGGATTGGGTGAATTTGGTGATCGCTACTTCGGTACCGATGATTGATCCCTTCTGTGTTATCCTAAGGTGGAGATTCAGCAAAAACCAGCATGCTTATGATTTGAGGTAAGGCAGATAATAATAATATGACTGCACTACTCAAACGTTGATATGGACGAATGATTTTCATATTATTGAATGTAGAGATCATTCATAGCAAGCTGATGTTGCCGCACACAAATTGGTTTACACAATTCTACCCATCTTGTTCTGCAAAGTTGGTTATGTGAAAAAGTATTTCGTAGTTATCAATACAATTTATAACTAACCAGATCTAGTCTATATTTGCAAACTGCGTGTCATTGTATTTTATACATATCTGATAATGTAAAATTACTATAGCTTGAACAATTTCTTCATCTATGACGATGCCGATAGTTGAGGTGATCTAACTATGGGGGAGACTGAAATAATTATCTTAATGAATAAATAGTCTATGCATTGATATTATAAATAATTTGCATACTATTGTAATAGCTAATTGA 1994 0.4152 KTSRITQVSQGIFDALTIHSGAFFITRTKPYSAAAAAARARCNPSKRRRNFKTTMPEETTSIDYGPTSPASDSTASFRCPHSRPNPNPDSFPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLDSFYRGLRPEEMERVHEYNFDHPECMRKLISGQGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQGVRELMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEMYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIKKGVPENHIIFLNLISAPEGIHCVSKRFPSLKIVTSEIDVELNEEYRVIPGLGEFGDRYFGTDD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00208 504 PRINTS Uridine kinase signature 215 225 - -
Pste5g00208 504 PRINTS Uridine kinase signature 122 133 - -
Pste5g00208 504 PRINTS Uridine kinase signature 229 240 - -
Pste5g00208 504 PRINTS Uridine kinase signature 95 112 - -
Pste5g00208 504 PRINTS Uridine kinase signature 251 264 - -
Pste5g00208 504 PANTHER URIDINE KINASE 81 413 - -
Pste5g00208 504 Pfam Phosphoribulokinase / Uridine kinase family 97 271 IPR006083 GO:0005524|GO:0016301
Pste5g00208 504 CDD PRTases_typeI 360 475 IPR000836 -
Pste5g00208 504 SUPERFAMILY PRTase-like 286 503 IPR029057 -
Pste5g00208 504 CDD UMPK 97 283 IPR000764 -
Pste5g00208 504 Gene3D - 92 286 IPR027417 -
Pste5g00208 504 FunFam Uridine kinase 92 286 - -
Pste5g00208 504 Gene3D - 287 502 IPR029057 -
Pste5g00208 504 MobiDBLite consensus disorder prediction 44 93 - -
Pste5g00208 504 Pfam Uracil phosphoribosyltransferase 301 502 - -
Pste5g00208 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 276 IPR027417 -
Pste5g00208 504 FunFam Uridine kinase 287 502 - -
Pste5g00208 504 MobiDBLite consensus disorder prediction 55 83 - -
Pste5g00208 504 ProSiteProfiles UvrC family, homology region profile. 189 272 IPR001162 GO:0009381
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00208 Pste-Chr5 1556365 1569371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00208 92 504 PRT Gene Family AT5G40870 87.765 0.0 759