Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00195 ACAACAAAAATGGAATTGCAGGTTAATGCAGTGGAGAATAAAAGGAGGGTGTGTTTGGTTTGGGAAGATTTGACAGTGGTGGCACAAAATGTTAGCAGTAGTTCAAAAAGGGAAGTGTTGAAAGGGTTAAGTGGTTATGCAGAACCCAACAGGATTATGGCACTAATTGGTCCTTCAGGATCTGGCAAATCTACTTTACTTGCTGCACTCGCTGGGATACTTCCCAGCAATGTTAGAATGACCGGAAATGTACTTCTCAACGGGACTACCAGAACTAAAGGCTGCAGAGATATTTCATATGTTACTCAAGAAGATTATTTCTTGGGAACTCTAACAGTGAAGGAAACCCTCACATATGCTGCACACTTGAGACTTCCTGCTGATATGAATAAAAACGAGATTGACAAGGTAGTAACCAAGATATTGGCTGAAATGGGTCTGCAAGATAATGCAGATAGCAGAATTGGGAATTGGCATTTGAGAGGCATAAGTAGTGGAGAGAAAAGAAGACTTAACATAGGCATTGAGATCTTAACTCAACCTCATGTAATGTTTCTGGACGAACCCACCAGTGGTTTGGATAGTGCAGCTGCTTTCTATGTGATTTCTTCTTTGTCAAACATAGCTCATGATGGAAGAATAGTTATATGCTCCATTCACCAGCCATGTGGTGAGGTTTTCAACCTATTTGATGATCTGGTCCTCCTTGCAGGAGGTGAAGCTGTATATTTTGGAGAAGCAGCTATGGCTGTAAAGGTAGAGAAAGTTCTATTAGTTTTACCACCTGAGAAGAAAACAAAAAATAGCCATTTTATAAAGCTACTAAACTCTCTTCTTCCTTTCTTTGCTGATGCAGGGTTTCCTTGTCCAATAAAAAAGAATCCTCCTGAGCATTTTCTTCGTTGTGTTAGTTCAGAGTTTGATAGTGTTACAACCTTAATACAGTCCAGAAATGTCAATATCGATGAAGTCTTATCTTCATCGAATTCTCTTATGAAAATGACGACAAAGGAGATCAAATCAGAACTTGTAGAACACTACAAGAATTGCATACATTCTGCAAATGCAAGGATGAAAATCAGAGATATAAAAAAAAGTAAAGAATCTTTGGTTGGGAAAATATATAAGACCAGCAAGCTGAAGCAGCTACGCACATTGACAAACAGATCATTTCTAAATATGACTAGAGAAATTGGTTACTATTGGTTGAGGATTGTATTCTATATCATAATATCAGTGATTGCTGGTTCTCTTCTTTTCAACATAGGAACAAGTAATGAAGCAATCTTTTCTAGAGGAAAGTGTGATGGATTCATCTTTGGCTTAATGGTCTTCTTGTGTTTAGGCGGCGTACCCTTTTATCTTGAGGAATTAAAGGTCTTCAAACGTGAAAGGTTTGGACAGCATTATGGGGTGGCCATTTTTGTGATGTCACATTTCCTCTCATCATTCCCTTTTGTTCTTGCAATTTCCCTCTCTTCAGGAACAATACTTTATCATATGGTCAACTTTCATCCAGGCTTCTCTCATTACTGTTATTTTTGCATGAATATGTTTTGTTTCATTTCTATCACAGAAGGCTGCATATTATTTGTTGCAGCGCTTACACCCAACCTATTGGTAGCAGTTGGAGCTGCAACTGGTGTAACTGTATTGATGATTCTACCATCTAATATGTTCAGAAGTCTAAGAGACCTTCCGAAATTCTTTTGGCGCTATCCAATGTCCTATATCAGCTACATTGCATGGTCCATACAGGGTCAGTTCAAGAACGACCTAATTGGTCTTGAATTTGAGCCACAAGTGCCTGGGGATACCAAGATAAATGGTGAAGAGATACTTCACACTATGTTTGGAATTCGAACTGATTATTCGAAATGGTGGGACTTAGCAGTTTCGGTTTGCTTCTTGATATGTTATAGATTATTTTTTTTCTTGGTTCTTAAGCACAAGGAGAAAGCTTCATCATTATTATACACCAAATAAATTATCCTACACATTAAGGTTTTTAGCTCAGTTGCTAATTGCAACTGCATTTGCCATGAGCTGATTAATAATTTCTGTCGAAAAATCTAATCAATATGGTAAAGTTCTTTCTTTAATTCTCTATAACTTTATGGTTTGTCTCTCATGCCGTAGGAGAATATGTACTTATGTATGCTTGACTTTATGCATGTGATGTGATCATGTGAAC 2194 0.3765 MELQVNAVENKRRVCLVWEDLTVVAQNVSSSSKREVLKGLSGYAEPNRIMALIGPSGSGKSTLLAALAGILPSNVRMTGNVLLNGTTRTKGCRDISYVTQEDYFLGTLTVKETLTYAAHLRLPADMNKNEIDKVVTKILAEMGLQDNADSRIGNWHLRGISSGEKRRLNIGIEILTQPHVMFLDEPTSGLDSAAAFYVISSLSNIAHDGRIVICSIHQPCGEVFNLFDDLVLLAGGEAVYFGEAAMAVKVEKVLLVLPPEKKTKNSHFIKLLNSLLPFFADAGFPCPIKKNPPEHFLRCVSSEFDSVTTLIQSRNVNIDEVLSSSNSLMKMTTKEIKSELVEHYKNCIHSANARMKIRDIKKSKESLVGKIYKTSKLKQLRTLTNRSFLNMTREIGYYWLRIVFYIIISVIAGSLLFNIGTSNEAIFSRGKCDGFIFGLMVFLCLGGVPFYLEELKVFKRERFGQHYGVAIFVMSHFLSSFPFVLAISLSSGTILYHMVNFHPGFSHYCYFCMNMFCFISITEGCILFVAALTPNLLVAVGAATGVTVLMILPSNMFRSLRDLPKFFWRYPMSYISYIAWSIQGQFKNDLIGLEFEPQVPGDTKINGEEILHTMFGIRTDYSKWWDLAVSVCFLICYRLFFFLVLKHKEKASSLLYTK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00195 658 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Pste5g00195 658 Gene3D - 8 256 IPR027417 -
Pste5g00195 658 SMART AAA_5 46 245 IPR003593 GO:0016887
Pste5g00195 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 245 IPR027417 -
Pste5g00195 658 Pfam ABC-2 type transporter 379 584 IPR013525 GO:0016020|GO:0140359
Pste5g00195 658 Pfam ABC transporter 37 188 IPR003439 GO:0005524
Pste5g00195 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 16 260 IPR003439 GO:0005524
Pste5g00195 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 10 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00195 Pste-Chr5 1478762 1484231 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00195 35 218 Calmodulin-binding Proteins AT2G36910 28.125 2.65e-09 58.5