Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00190 GTATGTTGATGATATGGGAAGATATAACAGTAGAATGCCATGATAGTTATGGAAGAGAGCATGGAAAGAAGAAGTTGCTTAATGGAATCACTGGTTTTGCTGAACCTGCCAGGATCATGGCTGTCATCGGTCCCTCTGGCTGCGGCAAAACCACCTTCCTTCACTCTCTCTCTGGAAAACTTACTGCAAATGTTGTACTAACTGGGAGCATTCTAATCAATGGGAAGAAGAAAAGCTTGTATTCCAAAGAAGTGTCCTATGTGACTCAAGAGGAACTTTTCTTGGGAACTTTGACTGTAAGAGAGACTCTCACACTCTCTGCAAACATAAACATAGTGGTGGAAGAAACCATAATGGAAATGGGTCTGGAAGGCTGTGCAAATACTAGGATTGGGAATTGGCATTGCAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTAGCCTTGAGATTCTGATACAACCACATGTCTTACTTCTTGATGAACCTACTAGTGGACTTGACAGTGCCTCGGCTTTCTATGTGATTCATGCTCTATGCAACATTGCTCACAATGGAAAGATAGTTATCTGTTCCATTCACCAGCCCAGTAGTGAAACTTTTGATCTATTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACCGTTTATTTTGGACAAGCCAAGATGGCTCTAAAGGATTACCCTGTCCTTCTAGAAGAAATCCTTCGGATCATTTCCTTTTGTCCATCTTCATCAAATTCAGCACTGGGAATGAGAAAAACTGAGATTAGAGAGACACTCATTCGGAGTTATAAAAGTTCTGTGTTAATGATCAATGCCAGAAGAAAACTTCAACAACTGAAACCTAATGAAGAGCAAAAAACTAAGACAAGCATAGGTAGTACTACCTCAGGGAGGAAGCAACTGTTCACATTGACCAAGCGATCTTTCCTAAACATGACCAGGGACATTGGTTACTACTGGCTGAGGTTAGTATTCTACATACTGATAGGAATTACTATTGGCACCCTCTTCTTTCATATTGGCACAGACAACAACTCAATTTTGGCTAGAGGAAAGTGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGAGGATTACCATTTTTCATTGAGGAATTGAAGGTTTTCTATGGAGAAAGGTCCAAAAGGTATTATGGAGAGGCTGCATTTGTGGTATCAAACATCATATCTTCATCCCCTTTCCTTGTTCTAATATCGCTCTCGTCCGGAATGATCATTTACTTCATGGTGCAATTTCATCCGGGCTTAACTAATTGTGCATTTTTCTGTATCAACTTATTCTGCTGCCTATCTGTTGTTGAGTGTTGCATCATGATTGTAGCCTCAGTGGTTCCAAATGTCTTCATGATGATGCCCTCTCAAATATTCAGATCATTGCCAGATATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTAAGTTTTGCTGCTTGGGCAGTTCAGGGACAATACAAGAATGACATGTGGGGGGTTGAATTTGATCCTTTTCTGGCAGGAGATGCCAAAGTTAGTGGAGAACAAATCCTGACATTGGTATTTGGGGTTCCATTGGATCATAGCAAACGGTGGGACTTAACAGCTTTGGCTACCTTATTATTAGTTCACAGATTGGTTCTTTACTTAGTGCTTCGGTTTGTCAAAAGATCTAATTCACCTAAGCTGTGGTTTTTTGCCAAGAAAAGTCTACACTCTGCACAAAGATGTTTATTCAATAACAAGCCATCCAACACTTCCAGGAAACAAGCTCATAAGCATCCAGTCTCAAGAGGGTGTCATGTTCCCAAACCAGTTGATATAATACTTACATATGGTGATACAAAT 1868 0.4036 MLMIWEDITVECHDSYGREHGKKKLLNGITGFAEPARIMAVIGPSGCGKTTFLHSLSGKLTANVVLTGSILINGKKKSLYSKEVSYVTQEELFLGTLTVRETLTLSANINIVVEETIMEMGLEGCANTRIGNWHCRGISNGEKKRLSISLEILIQPHVLLLDEPTSGLDSASAFYVIHALCNIAHNGKIVICSIHQPSSETFDLFDDLLLLSSGETVYFGQAKMALKDYPVLLEEILRIISFCPSSSNSALGMRKTEIRETLIRSYKSSVLMINARRKLQQLKPNEEQKTKTSIGSTTSGRKQLFTLTKRSFLNMTRDIGYYWLRLVFYILIGITIGTLFFHIGTDNNSILARGKCVSFIYGFMICLSCGGGLPFFIEELKVFYGERSKRYYGEAAFVVSNIISSSPFLVLISLSSGMIIYFMVQFHPGLTNCAFFCINLFCCLSVVECCIMIVASVVPNVFMMMPSQIFRSLPDIPKFFWRYPMSYLSFAAWAVQGQYKNDMWGVEFDPFLAGDAKVSGEQILTLVFGVPLDHSKRWDLTALATLLLVHRLVLYLVLRFVKRSNSPKLWFFAKKSLHSAQRCLFNNKPSNTSRKQAHKHPVSRGCHVPKPVDIILTYGDTN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00190 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 228 IPR027417 -
Pste5g00190 622 Pfam ABC transporter 33 166 IPR003439 GO:0005524
Pste5g00190 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 571 - -
Pste5g00190 622 Pfam ABC-2 type transporter 303 497 IPR013525 GO:0016020|GO:0140359
Pste5g00190 622 Gene3D - 7 239 IPR027417 -
Pste5g00190 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 238 IPR003439 GO:0005524
Pste5g00190 622 SMART AAA_5 35 223 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00190 Pste-Chr5 1401215 1410687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00190 33 230 Calmodulin-binding Proteins AT2G36910 26.636 8.55e-10 60.1