Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00186 ATGTGGTTCTGGAGAAAGAGTGATATTTCTAACTTTTGGAAGCTTGAGAAACTCGAGAAGGAGGTTTTGGGAGATCCAAATTGGAATTGGGTGGAGGAAGAAGTTGAGGTTGCAGAGGGGAGGCCAACAAATGAAGTAGTTGCTCTTGTTGTCTTAGAAGCCCTCGGTCACGCTTTTGTTGGGCCCGATCCGATTCTGTTGCCGTGCCCAAAGTTGGCCTGTTTTTCCCCACACACCATCGGAGCTTGGGCTCTCCTCCGGCCGGCCCAACTTGGAACGCTCCCGTGGATTCTTCAAAACGCGCCAGCGCCCAAAGATGAACCACGCCGGCACGTGGCCCTCGGTCTTCACGTGACGCAGACTAACGCGACGCAGACTGACGCGGCGCAGACTGTCCTGGCGACGTGGCTCGGTATGTGCGCCCCAGGTCTCGATAATAGCACCGCGTCTCCTGAGACGCGCTTCCTTCAACGGCTGGATTTACGCCACGCAGCCCCATCCGGCGTCCAACGGCCCGATCTTGTCCACTCCCGTCTCCAACGGTCGGATTTGCTCCACGCGGTCCTGACGCACCCTGACCCCAGCCGGCACGTGGCCTTAGGTCTTCACGTGACGCAGACTGACGCGACGCAGACTATCTTGGCGACGTGGCTCGGTACGCACGCCCCGGGTCTCGATAATCGCGTCGCGTGTCCTGAAACGCGCTTCCTTCAACGACTGGATTTACGCCATGCAGCCCCATCCCGCGTCCAACGGTCCGATCTTGTCCACGTTGTCCTACCGCGTCGTACTCTGCCGCGTGGTGCTCTACCGCGCCGACCTGCGTGCGGCGTCTGCTCGGGCCGACTCGTGCGATCATCCGTCAACAGTATCGATAGTCGTGCCACTGATCTCGATAAGCGTTCCCATTTCACAAGCAGACCTTCATTTTCTTCTTCCCGCCATTTCGCTCTGCACCTGCTCTCCTCGGCTTTCTGTTTTCCTTTCCTTAAAATCCACTCGTCTGCACTAGCCATCCGCCGTGGCTCCACTGCTTCTACATTCACCGACCACCCCTATTTTCCCCGTCCCGGCTTCCGGAGTTCTGCTTGTAGAACTGTATCGGTGTATCTCGTTAACCTCCGTGACTCCTCCCTGCCAACGACCCGGACTGAAAAGACATATATTGATGTAAGTGAGAAGATAACATACATCAACACTACTCCCACTCCGAATTCGAGTCAAGCAGCTATGGTGATGATATGGGAAGATATAACAGTAGAGTGTCGTGATAGTTATGGAAGAGAGCATGGGAAGAAGAAGTTGCTTAATGGTGTCTCTGGTTTTGCTGAACCTTCCAGGATTATGGCTCTTATTGGTCCTTCCGGCTGCGGCAAAACCACCTTCCTTCACTCTCTCTCTGGAAAACTTGCTGCAAACGTTGTAGTAAGTGGGAACATTGTAATCAATGGGAAGAAGCAAAGCTTATATTCCAGAGAAGTGTCCTATGTGGCACAAGAGGAGCTTTTCTTGGGAACTTTGACTGTAAAAGAAACCCTCACATACTCTGCAAACATGAGGCTTCCGTCTAAAATGACCAAGGAAGAGATAAACAAAGTGGTGGAAGAAACAATAATGGAAATGGGTCTGGGAGATTGTGAAAATACTAGAATTGGTAATTGGCATTGCAGGGGTATTAGTACTGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTTTAACACAACCCTATGTCTTACTTCTTGATGAACCTACTAGTGGACTTGACAGTGCCTCAGCCTTCTATGTGATTCAAGCTCTATGTCACATTGCTCGAAATGGAAAGATAGTTATCTGTTCCATTCACCAGCCTAGTAGTGAAATTTTTAATCTATTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTCTATTTTGGAGAAGCAAAAATGGCTCTAAAGTTTTTTGCCGACGCAGGGTTTCCCTGTCCTACTAGAAGAAATCCTTCAGATCATTTCCTTTTGTGTATTAATTTGGACTTTGACTTGATTACTGAAGTGCTAGAGAGGACACAATTAAGTTCGGTATGCAACATCAAATTCAACACTGGGAATGAGAACGTCAGAGATCAGAAGAAAGCTGATTGGGAGTTACAAAAGTTCAAAGCTAATGATCAATGCAAGAAAAAAAATTCAACAACTGAAACACAATGTAATGAAGAGCAAGAAATTAAGCGCTACATAGGTAGCACTACCACATGGAGGAAGCAACTGTGTACATTGACCAAGCGATCTTTCCTAAACATGACGAGGGACATTGGTTACTACTGGCTCAGGATAGTATTCTACATGCTGGTAGGAATCACTATTGGCACCCTCTTTTTCCATATTGGCACAGGCAACAACTCAATTTTGGCAAGAGGAAAGTGTGTATCATTCATCTACGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTAAAGGTTTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTAGTATCAAACATCATAGCTTCATTCCCTTTCCTTGTTCTAATATCGCTCTCCTCCGGAATAATCATTTACTTCATGGTGCAATTTCATCCGGGTTTGACTAATTGTGCATTTTTCTGTATCAACTTATTCTGCTGCCTATCTGTTGTTGAGTGTTGCATCATGATTGTAGCCTCAGTGGTCCCCAATGTGCTGATGGGCCTAGGAACAGGAACTGGTGTAATTGTAAGCAAATCCTTTTTTCAAATCCTGAAGTAA 2790 0.4742 MWFWRKSDISNFWKLEKLEKEVLGDPNWNWVEEEVEVAEGRPTNEVVALVVLEALGHAFVGPDPILLPCPKLACFSPHTIGAWALLRPAQLGTLPWILQNAPAPKDEPRRHVALGLHVTQTNATQTDAAQTVLATWLGMCAPGLDNSTASPETRFLQRLDLRHAAPSGVQRPDLVHSRLQRSDLLHAVLTHPDPSRHVALGLHVTQTDATQTILATWLGTHAPGLDNRVACPETRFLQRLDLRHAAPSRVQRSDLVHVVLPRRTLPRGALPRRPACGVCSGRLVRSSVNSIDSRATDLDKRSHFTSRPSFSSSRHFALHLLSSAFCFPFLKIHSSALAIRRGSTASTFTDHPYFPRPGFRSSACRTVSVYLVNLRDSSLPTTRTEKTYIDVSEKITYINTTPTPNSSQAAMVMIWEDITVECRDSYGREHGKKKLLNGVSGFAEPSRIMALIGPSGCGKTTFLHSLSGKLAANVVVSGNIVINGKKQSLYSREVSYVAQEELFLGTLTVKETLTYSANMRLPSKMTKEEINKVVEETIMEMGLGDCENTRIGNWHCRGISTGEKKRLSIGLEILTQPYVLLLDEPTSGLDSASAFYVIQALCHIARNGKIVICSIHQPSSEIFNLFDDLLLLSSGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFLLCINLDFDLITEVLERTQLSSVCNIKFNTGNENVRDQKKADWELQKFKANDQCKKKNSTTETQCNEEQEIKRYIGSTTTWRKQLCTLTKRSFLNMTRDIGYYWLRIVFYMLVGITIGTLFFHIGTGNNSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIIASFPFLVLISLSSGIIIYFMVQFHPGLTNCAFFCINLFCCLSVVECCIMIVASVVPNVLMGLGTGTGVIVSKSFFQILK 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00186 929 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 401 920 - -
Pste5g00186 929 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 420 659 IPR003439 GO:0005524
Pste5g00186 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 649 IPR027417 -
Pste5g00186 929 Gene3D - 416 659 IPR027417 -
Pste5g00186 929 SMART AAA_5 445 636 IPR003593 GO:0016887
Pste5g00186 929 Pfam ABC-2 type transporter 616 668 IPR043926 GO:0140359
Pste5g00186 929 Pfam ABC transporter 437 587 IPR003439 GO:0005524
Pste5g00186 929 Pfam ABC-2 type transporter 751 920 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00186 Pste-Chr5 1382237 1398978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00186 399 628 Calmodulin-binding Proteins AT2G36910 25.311 2.60e-10 62.8