Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00179 CAAGACCCTCTTAGAAAAAGATCATTTTTTTGGGTTTCTTTTCTCTGGTTCTTCAACTTGGAACCGGGTTTTTGGCCTTCTTTTTATTATTAAAATAATGGAGGATGGTTCAAGAAATAGGACTCGTGATTTCAAAATGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGGAGACGCTATGAGGCCACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGTATATCAATCCAGCCTACAGAGAGGGAACTTATTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAAGTTGTGGTTGTGGATAATCAAGTGGCTTCGCAATCACTTACATGGGATTCACAACCTTTGCCGGCCTATCAGTATTTTGAAAATTTACGCAATTTTCTGGTTGCAATGGAAGAATTAAAGCTTCCCGCTTTTGAAGCTTCTGACCTTGAAAAGGATCCGCTAGAGATGGGGTCAGCAGCAAAAGTGGTTGATTGCATTTTGGCACTTAAATCGTTTCAAGAGTTGAAGCAGACGAACAATCAGAATGGATCCAACAAACACATAAAATCTCCTTTATCTATGATAATGCATTCAAGAGCAGCTGCTGCATTCCCCTCTGATGCTTGTAGGCCCTTGGATTTGTCTGCCACAACAGAAAAAATGCCTCCCATTGAGAATAATTTTCCTAAACGAGAAGAAATTGTTGAATTACTTTCCAAGATGATCGTTGACCGTATGTTTGATGCCAAAGAAAATATTGATGGAAACATCATTGCTTCTCTTCGTAAAGAAGACCTGATAGCAGATCCAATAAAGGCATTTAATCAGATAATGGGATGTTGTAATGGGGAACAGCTGCCTACAAGGTTCCATGAGGATTTTGTAAAAGAAAAGGGTAGCTTGCCACATCATTCCACTTCTACTGCTACACAATTGAATGCTTTATACGCTCCTGACAATTCTAAGTGTTGCCAAACTTGCTCCGGAAAGTGCAAGTGCAATCAGGAGCATCTTTTAGACATGCAGGAAAAAGAACTTCTGGATCTCAAGTCTTTAAAGTTAAAAATAAAGGAAGAGTTTGAAGCGATGCAGTCACATTTTCAAGGGTTTTTTACTGATATTGGCAGTCTAATACAGGAGATGTCAACTAAAGCCCTTGGATATCACAGAGTAGTAGAAGAGAATAGGAAACTATACAACATGGTCCAAGATTTAAAAGGTAATATTCGAGTATACTGCAGAATCAGGCCATCATTCCTGGCTGAATCAAGGAATATTGTTGATTTCATTGGGGAAGATGGTTCCTTATTCATTATAGATCCAACAAAAACACTGAAAGATGGAAGGAAACTTTTTCAATTTAATCGGGTTTTTGGTCCAACTGCTGACCAAGCTGAGGTTTATAAGGATACTCAACCATTAATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTTGCATACGGTCAAACTGGATCCGGGAAGACTCATACCATGGGTGGTCCTTCAGGTGGAAAATCTAAAGATTTGGGAATCAACTATCTGGCTCTTAATGATCTGTTTCAAATGTCTAATGAAAGGAAGAACATCATAAACTATGATATTTATGTTCAAATGGTTGAAATTTACAATGAACAAGTTAGAGACCTACTAGCAGAGGACAAAACTGACATCAAATTAGAAATCCGAAGTTGCAATGATGATGGGTTGAGCCTTCCTGATGCCAGATTGCACTCAGTGAAGTCTACAACTGATGTTATGACCCTCATGAAACTTGGTGAGATTAATCGCGCTGTCAGTTCCACTGCAATGAACAATAGGAATACATCTGGAGCTCCATTCGCAGATTGCTCGCACTTAGTAGACCTAGCTGGAAGCGAACGAGTAGACAAGTCAGAAGTTACAGGGGAAAGGCTAAAGGAAGCGCAATTTATAAACAAGTCTCTTTCCTGTTTGGGAGATGTGATCGCAGCCTTGGCTCAAAAGAATTCTCACATCCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCGTTAGGTGGTCATGCTAAAACACTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCATTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGCGGGTTTCCACTGTGGAACTTGGGGCAGCTCGTTTGAACAAAGAAAGCAGTGAGGTCATGCAACTTAAGGAACAGGTTGAGAACCTTAAGATTGCATTGGCAACCAAGGAAGGTCAGAGAGTAATGTTCCAAAGAATTAAAGAACCACACACTCCATTAGAGAAACCAATACTATCTGAGAAAAGTCCGTTGCACCCTCGAAGACTTAGCATTGAGAACTGCAGCGCTGTAAAGACTGACAAATCTGTGAATCATGACTATAGAAGTGGAGCCAAATCACCACCTTTATTACCTCGTTCGAGAAGACTAAGCTTGGAAGGTTCGAAGACTATCAAGAAAGATAGTTTACAGCCCAAAGTATCAGATGATATAATAAGCAAAGCTTTACAGTATGAGCCAGGGTCTCGACAGAAATATAATTCAACACAAGATCCAGAATCAGCGTCAAAACTAAATGGTCAGATCAGCAGTGGCAATTCCATGTCAGAGATACATGCCAAAGTTCCGCGAAGTCCTACAAGCATTTCCTATCAAAAGAGATTAATAAAAGTAAATGGTGGGATGCAAGTTCATCCTCTTAAACTGCCTCAAACACCTGAACCAGCAGTGCGGAATGGAAATGATGCACGTGGCATAAAGGTGACAGGTAACTCAAACGGAAAAGGATCCCAGATAAGAAGATCCTTGAGAACAATTGGGAAATTGATTAATGGCCCTGATAAAAAGAGCCAACAAGTTATGGTTGAGGTTAAGTCACCCATGAAGAGCACTGGCCATACAAATCATGTAAAATCACCAATTTCATCTGTTGAGAAGACAAAGAGGAGGCAATCACTAACGGGGATTCCACCACCACCGCCAAATAACTCACGTAGATCTTCACTTGGAGGAAAGCCAGTAGTAGCGTATAACAAGGAAACAAATGCTAGAACTCCTCCTTCCCATTCAGACTCCAAGACTGCAAAACGGTGGCTATAGAAATTGAAGGCTTCGACTTGAAGCCAACATTGCTAACTTAGTTTAGGACAAGCTCCACCTCAGGGAGAGTTTTGGGTTTTGGATCAAGTAACAATGTAGAAAGTATTTGTAGATACTCTGATTATTATTATATTTCAATTTTCAAGGAGGCTATCATCTATCTTTTCCAAA 3307 0.4034 MEDGSRNRTRDFKMASRKAEEAAWRRYEATQWLESQVGPLGISIQPTERELISCLRNGLILCNAINKIHPGAVPKVVVVDNQVASQSLTWDSQPLPAYQYFENLRNFLVAMEELKLPAFEASDLEKDPLEMGSAAKVVDCILALKSFQELKQTNNQNGSNKHIKSPLSMIMHSRAAAAFPSDACRPLDLSATTEKMPPIENNFPKREEIVELLSKMIVDRMFDAKENIDGNIIASLRKEDLIADPIKAFNQIMGCCNGEQLPTRFHEDFVKEKGSLPHHSTSTATQLNALYAPDNSKCCQTCSGKCKCNQEHLLDMQEKELLDLKSLKLKIKEEFEAMQSHFQGFFTDIGSLIQEMSTKALGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFLAESRNIVDFIGEDGSLFIIDPTKTLKDGRKLFQFNRVFGPTADQAEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMGGPSGGKSKDLGINYLALNDLFQMSNERKNIINYDIYVQMVEIYNEQVRDLLAEDKTDIKLEIRSCNDDGLSLPDARLHSVKSTTDVMTLMKLGEINRAVSSTAMNNRNTSGAPFADCSHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVIAALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKESSEVMQLKEQVENLKIALATKEGQRVMFQRIKEPHTPLEKPILSEKSPLHPRRLSIENCSAVKTDKSVNHDYRSGAKSPPLLPRSRRLSLEGSKTIKKDSLQPKVSDDIISKALQYEPGSRQKYNSTQDPESASKLNGQISSGNSMSEIHAKVPRSPTSISYQKRLIKVNGGMQVHPLKLPQTPEPAVRNGNDARGIKVTGNSNGKGSQIRRSLRTIGKLINGPDKKSQQVMVEVKSPMKSTGHTNHVKSPISSVEKTKRRQSLTGIPPPPPNNSRRSSLGGKPVVAYNKETNARTPPSHSDSKTAKRWL 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00179 1012 Pfam Kinesin motor domain 410 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 Pfam Kinesin motor domain 595 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 Coils Coil 314 334 - -
Pste5g00179 1012 MobiDBLite consensus disorder prediction 898 912 - -
Pste5g00179 1012 MobiDBLite consensus disorder prediction 939 963 - -
Pste5g00179 1012 ProSiteProfiles Calponin homology (CH) domain profile. 23 149 IPR001715 GO:0005515
Pste5g00179 1012 Coils Coil 696 726 - -
Pste5g00179 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 691 IPR027417 -
Pste5g00179 1012 Gene3D - 15 150 IPR036872 -
Pste5g00179 1012 FunFam Kinesin-like protein KIN-14L 11 176 - -
Pste5g00179 1012 CDD CH_AtKIN14-like 25 146 - -
Pste5g00179 1012 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
Pste5g00179 1012 MobiDBLite consensus disorder prediction 820 845 - -
Pste5g00179 1012 MobiDBLite consensus disorder prediction 878 912 - -
Pste5g00179 1012 PRINTS Kinesin heavy chain signature 593 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 PRINTS Kinesin heavy chain signature 642 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 SMART ch_5 25 144 IPR001715 GO:0005515
Pste5g00179 1012 MobiDBLite consensus disorder prediction 816 845 - -
Pste5g00179 1012 SMART kinesin_4 381 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 ProSiteProfiles Kinesin motor domain profile. 383 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pste5g00179 1012 Gene3D Kinesin motor domain 325 694 IPR036961 -
Pste5g00179 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 883 IPR027640 GO:0003777|GO:0007018
Pste5g00179 1012 MobiDBLite consensus disorder prediction 760 786 - -
Pste5g00179 1012 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 325 694 - -
Pste5g00179 1012 SUPERFAMILY Calponin-homology domain, CH-domain 22 157 IPR036872 -
Pste5g00179 1012 MobiDBLite consensus disorder prediction 939 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00179 Pste-Chr5 1335942 1343600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00179 371 738 Calmodulin-binding Proteins AT5G65930 38.619 1.53e-60 224