Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00126 ATGGCGTCTTTCACTTGCTCTGCACCAAAGAAGAAGGTTGTGTTTATAATGGGTGCAACTGGAACAGGCAAAACGAAGCTTTCGATAAACTTGGGCACTAAAATTTCGTCGGAAATCATAAACTCTGACAAAATCCAAGTGTACAAAGGGCTTGACATCATAACAAACAAGGTGCCAGAGTGTGAACGAAGAGGCATTCCACATCATCTGCTAGGCATAATTGATGACCCCGATTATGACTTCACAGTTGATGAATTTTGCCAGAATGTACTTGATGCTCTTGATCTCATAATCCAAAATGGACACGTGCCCATTATCGTGGGAGGCTCCAACAATTACCTCGCAACCTTGCTCGAGGATCCCAACGTTGCATTTCGTTCCAAATATGATTGCTGCTTCATCTGGATTGACGTGTCTTTACCTGTCTTGTTTCGGTACTTAGGTAAAAGGGTGGATCAAATGCTTGATGAGGGAGTTGTGGATGAGATTCGACAAGCTTTTGAGCCTGAAGCCGATTACTCTCGTGGGGTTAGAAGAGCCATTGGAGTTCCTGAGCTTGCTCACTATTTCCTCATTGAGAAGGAAATACATGATGAGTCTCAAAAGAAGAAGCTGCTACAACATGCCATTGCCAGAACCAAAGATAACACTTGCAAGTTGGCTCAGATGCAACTCATGAAGATCCATAGGATGAATTATGAGCTTGGATGTGTAATGACTAAAATTGATTCCACACAGGTTTTTCAGGCTGTTTTAGAAGGACTCGATTATAACAACTTGTACCAGGATATTGTGTTCAAACCAAGCTTGGAGATAGTCAAAAGATTTCTTCAGGACCCAACTCCTCTATTGGAAAAGACACCACGTCAAAATGGTGAACAAGTTTCCATTTGTGCATAA 900 0.42 MASFTCSAPKKKVVFIMGATGTGKTKLSINLGTKISSEIINSDKIQVYKGLDIITNKVPECERRGIPHHLLGIIDDPDYDFTVDEFCQNVLDALDLIIQNGHVPIIVGGSNNYLATLLEDPNVAFRSKYDCCFIWIDVSLPVLFRYLGKRVDQMLDEGVVDEIRQAFEPEADYSRGVRRAIGVPELAHYFLIEKEIHDESQKKKLLQHAIARTKDNTCKLAQMQLMKIHRMNYELGCVMTKIDSTQVFQAVLEGLDYNNLYQDIVFKPSLEIVKRFLQDPTPLLEKTPRQNGEQVSICA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00126 299 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 277 IPR039657 -
Pste5g00126 299 Gene3D - 10 277 IPR027417 -
Pste5g00126 299 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 140 239 - -
Pste5g00126 299 FunFam Adenylate isopentenyltransferase 5, chloroplastic 140 239 - -
Pste5g00126 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 172 IPR027417 -
Pste5g00126 299 Pfam IPP transferase 46 120 - -
Pste5g00126 299 Pfam IPP transferase 127 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00126 Pste-Chr5 971270 972169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00126 127 281 C2H2 Transcription Factor Family AT2G27760 30.387 4.83e-16 76.3