Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste5g00125 | TTGAAACATTTTCTAAACCCTACTCCTCTCTCTGGGACAATGTCTTCCTCCGCGGCGGTGCATTTTGAATCCCCAATCAAGTCCTCTTCATCTGACGCCCAGTTCCTCCATTTCAATGCTGATTGTGTAAACCCTTCTGAAGGCCGCTCCAGGAGGCCCAGACTCGCCAAACTGAGGAAGCACCATGCTTCTCAGCAGGTCAGGTCCCGGGGCACAACCTCCACCTCCACCTCCACCGCCGCCGAGGATGCATCTTGTGCCGGATTCACTCATTTTCTCTCGGACAAGGTAACCAATAGTATTCATAATAATGGAGTCGTTAGTGATTCTGCGATCCAAAACCGTCATCGTGACGACGTGTTTGTGTTTGGGTCTGGTAGGGGCAATTGGGAGTCTGTTAGGGATTCCCAGGGATCGGATGAGGGCAAAATTGGACAATTTGTTTTTAGTCCTACACACAGTTATCCGGAAACAAAAAACAACGGTGAAAATGTTTCAGAGACCCTTTCTGCCTCTGGGGTGTTTGTTTTTTGTGCTTTTAGAAACAATGTCGGTGTGGGTGGGAAGGGGGTGTGTAAGTTTGAATTTGGTGGGAGTCATAGTGATCCAGAGTCGAGTGTCAATGTCGAGATACCGGAACCTGTTGGCAGCGTGTGGGATGCTACTCGTAGTGAAGTTCCAATGAGTAATCTATCAGATGAGATGGACAAGCTGAACATTAAAGATCCTGAGGGTGCTGCTGATATCACTAGAAATTCAGAGAATTCGCATGCTAGTGCTTCTGCTGGTTCTCCCCCACCTTCTAAAGAGTCTTTTACAGACTTCAAACCCCCGGCATGGGATCCTTCTTCTTTCAAAGACAACTTGTTTTCCAGCTTAAATAAAAAAGTTGAATCCACCCCAAAGGGTCGACTAAAATATATGAGGCAAAAATTGAAGCCTCATTCCTTAAAGAAGAAACAGGCGGGGTCAGGTCATTTGTCCAAGGAAAACAATGTGCCCCAAACCCCTGGTTCCTCTGGTATCCACTCACCCATGGATTTTTCTCCCTATCAGGAAACAACAGCAAATGATCAAGACCAACAGTTGCCTGCTATGGGGAGCAAAGATTCCAGACAAACAGATCAAAGGGGTAGTGGAGCTGGTGCCTCTGGGGTTGACTTCACCTCAAACACTGAGAAGCAAAAGGATGGTGTGTTTGTTTTTGTTCATGGTGTGAATGATTCCAAGGGGAAAGATTTTTCATTTTCTGCATCGTCAACTGTGGCGGGTGCACCACCATTAAAGCGTCAACAGAAGAAGAAATTTAGAAGGAGAGTGGGGTGCAACTCTTTTGGTATTTCTCCTAGTGTGAATGGAAAGCCTGTATCTTCTCTGCAATTTTCACCACATGACACTGCCAATTTGCAATCACATTCTAATGTCATGGATAGCTCTCAGACAAGCGACCAATTGAAGGAGGGAAATGTTGAATCATTAGATACAATTCCAGCAGCCTGTGATATGTGGAGACTCAGGGGGAACCAGGCCCATAAAGATGGGGATCTTTCTAAAGCTGAGGACTTCTACACACGAGGGATAAATTCTGTCTCTTCAAGTGAAAGATCAGAATGCTGGGTTAAGCCTCTTTTACTGTGCTATAGTAACCGTGCTGCAACACGGATGGGTCTGGGAAAGATCAGAGCAGCACTAGAGGATTGCATGAAGGCTTCAGCTCTGGACCCGGCCTTTCTAAAAGTACAGATGAGAGCTGCTAACTGTCATCTTTTGCTAGGGGAACTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGTTAGCATTGTTTGTTTGGACCGGAGGATCATAGTTGAAGCAGCTGAAGGTTTACATAAGGCTGAGGAAGTAGTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACTGCATTGGAACTAGTTTCTAAGGCATTGTCCATCAGTTTGTACTCGGAAAAATTGCTTCAAATGAAGGCAGAGGCTTTATGTTTGCAACAAAAGTATGATGCAGCTATTCAGCTTGCTGAACAGAGTCAGCATCTTGCTGAAAAGAATTTTTTCTTGGCAAAAACTGCAGAGAATTGTGATTGTTCCTTATGTGATAGTTACTCTAGTGTAAAATTGTGGAGATGGTCATTGATATCCAAGTGTTACTTTCATTTGGGAAGGCTTGAAGCATCACTTAATGTTCTTGAGAAATTACAGCATGTTGTGACCTCCACTGACAAGTGTGGGATTGATAACATGGAGGACTCGCTGACATTAGCTTCTACAATACAGGAACTTCTAAACCATAGGAGGGCAGGGAATGAAAATTTTAAATTGGGAAAGTATACGGAAGCTATAGCAAATTACACTGCTGCTTTATCATGCCATATTAAATCACGTCCTTTTATGGCCATTTGTTTCTGCAACCGTGCTGCTGCACATCAAGCTTTGGGCCAAATTGCTGATGCCATTGCAGACTGCAGTGTGGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACATGAGATGGTTAGAGATTATGAACAAGCAACTTGTGACCTCAAGAGACATATTACTGTTCTTGAATCTCAATCCAATGAAAGTACCAAAGAATCAAGGCAAGCTCATCAACGTTTGCATTCAGTGGAAGATCAAGCCAAGAAGGGAACACCCTTGGATGTTTACCTCATTCTTTGCTCTTCTGTTCTTTACAATGTCAACGCCAGAGGAATCAAATCAGCTGATACAGCGACAGATATCAAGAAAGCATATCACAAGGCTGCTCTCAGACATCATCCAGACAAGGCTGGTCAATTGCTGGCAAGAAGTGATGGTGGAGATGAAGGCCGAGTTTGGAAGGAGATTTCAGAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGAGAAGCGTATGCTGTCCTTTCAGACCCTGCCAAGCGATCCGAGTATGATCTGGAAGAGGAGATAAGAAAAGCTGCCAAGTTAAAGGTGGCACAAACAGGAGATCTTCAGATGCTTATGGGTGTGGAAGACCGTGTGATGGTTACAATTCCCACTCTGACAGAACGTCTAGCAGACGATATGGACGGGATCATTGGAAACATTCATACCCTCGATGGTAAGAGGATACTCATCCCATGGGTGTTGAGGTTCCTTGACCTGCTGAAAGTAACATTCTTTCTCATTCTTGATCGTATGAAAAAAAGAGGCTTAAATATGCTGTTGCAGGCCTTGATTGTTTTATTTTTTGGGTCTGAACCTAGCCATTACTCAAACAAGATTGTACTTACATTTTGCAAGCATGCCATAGTGATATACGGATGTTGCATTCCTTCAAGTAGCCAAGGACTTAGGCTTGGAAATGAGAGAAGAATAGGCCACACTAACAGGGATATATTTGCTAACACCAACTTAGATGGTAACAAGGCATTCATACTAATACAAACCTGCCCCAAATCCCATGCTCGTTGTTGGACGAGTTTTTCAAAGGGAAAGGGATTGTTCAAATACAGTCAGACAAACACAGACAACGGAGCCAATGCAGTTGGGTTTTTGCCACTTTATGAATGTAACAGACGCAGTTGTAATTATCATGTATCAATGTTTTATGTTGATTGAGGATCTTAATAGGAAGTGTTTCTATCACTAAGAAAAAAAGGAATCATACCATAAATACATGATTTTTTCAATCCATCCAAATTACGTATCCCATGTCATAGTTGAAAACTGCTTCTACATCTTTTTTCTTTCCTTTTTTTTAGATTCCAAGTGAGTGAACAGGGTATAGAATGTATAAAATATTTTTTGTGGATACAGAG | 3884 | 0.4282 | LKHFLNPTPLSGTMSSSAAVHFESPIKSSSSDAQFLHFNADCVNPSEGRSRRPRLAKLRKHHASQQVRSRGTTSTSTSTAAEDASCAGFTHFLSDKVTNSIHNNGVVSDSAIQNRHRDDVFVFGSGRGNWESVRDSQGSDEGKIGQFVFSPTHSYPETKNNGENVSETLSASGVFVFCAFRNNVGVGGKGVCKFEFGGSHSDPESSVNVEIPEPVGSVWDATRSEVPMSNLSDEMDKLNIKDPEGAADITRNSENSHASASAGSPPPSKESFTDFKPPAWDPSSFKDNLFSSLNKKVESTPKGRLKYMRQKLKPHSLKKKQAGSGHLSKENNVPQTPGSSGIHSPMDFSPYQETTANDQDQQLPAMGSKDSRQTDQRGSGAGASGVDFTSNTEKQKDGVFVFVHGVNDSKGKDFSFSASSTVAGAPPLKRQQKKKFRRRVGCNSFGISPSVNGKPVSSLQFSPHDTANLQSHSNVMDSSQTSDQLKEGNVESLDTIPAACDMWRLRGNQAHKDGDLSKAEDFYTRGINSVSSSERSECWVKPLLLCYSNRAATRMGLGKIRAALEDCMKASALDPAFLKVQMRAANCHLLLGELENAQQCFNKCMESVSIVCLDRRIIVEAAEGLHKAEEVVKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLQQKYDAAIQLAEQSQHLAEKNFFLAKTAENCDCSLCDSYSSVKLWRWSLISKCYFHLGRLEASLNVLEKLQHVVTSTDKCGIDNMEDSLTLASTIQELLNHRRAGNENFKLGKYTEAIANYTAALSCHIKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLHEMVRDYEQATCDLKRHITVLESQSNESTKESRQAHQRLHSVEDQAKKGTPLDVYLILCSSVLYNVNARGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSDGGDEGRVWKEISEEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKAAKLKVAQTGDLQMLMGVEDRVMVTIPTLTERLADDMDGIIGNIHTLDGKRILIPWVLRFLDLLKVTFFLILDRMKKRGLNMLLQALIVLFFGSEPSHYSNKIVLTFCKHAIVIYGCCIPSSSQGLRLGNERRIGHTNRDIFANTNLDGNKAFILIQTCPKSHARCWTSFSKGKGLFKYSQTNTDNGANAVGFLPLYECNRRSCNYHVSMFYVD | 1227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 295 | 390 | - | - | |
| Pste5g00125 | 1227 | ProSitePatterns | Nt-dnaJ domain signature. | 986 | 1005 | IPR018253 | - | |
| Pste5g00125 | 1227 | Gene3D | DnaJ domain | 912 | 1021 | IPR036869 | - | |
| Pste5g00125 | 1227 | Coils | Coil | 625 | 645 | - | - | |
| Pste5g00125 | 1227 | CDD | DnaJ | 929 | 998 | IPR001623 | - | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 500 | 533 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 544 | 577 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 816 | 849 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 778 | 811 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 668 | 701 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 850 | 883 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | SMART | tpr_5 | 578 | 611 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 249 | 268 | - | - | |
| Pste5g00125 | 1227 | SUPERFAMILY | TPR-like | 781 | 879 | IPR011990 | GO:0005515 | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 56 | 80 | - | - | |
| Pste5g00125 | 1227 | Pfam | DnaJ domain | 930 | 1006 | IPR001623 | - | |
| Pste5g00125 | 1227 | PRINTS | DnaJ domain signature | 925 | 943 | IPR001623 | - | |
| Pste5g00125 | 1227 | PRINTS | DnaJ domain signature | 943 | 958 | IPR001623 | - | |
| Pste5g00125 | 1227 | PRINTS | DnaJ domain signature | 981 | 1001 | IPR001623 | - | |
| Pste5g00125 | 1227 | SUPERFAMILY | TPR-like | 497 | 749 | IPR011990 | GO:0005515 | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 247 | 278 | - | - | |
| Pste5g00125 | 1227 | Pfam | Tetratricopeptide repeat | 580 | 606 | IPR019734 | GO:0005515 | |
| Pste5g00125 | 1227 | PANTHER | HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN | 25 | 256 | - | - | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 306 | 322 | - | - | |
| Pste5g00125 | 1227 | Gene3D | Tetratricopeptide repeat domain | 464 | 759 | IPR011990 | GO:0005515 | |
| Pste5g00125 | 1227 | SUPERFAMILY | Chaperone J-domain | 932 | 1009 | IPR036869 | - | |
| Pste5g00125 | 1227 | SMART | dnaj_3 | 911 | 1001 | IPR001623 | - | |
| Pste5g00125 | 1227 | Gene3D | Tetratricopeptide repeat domain | 777 | 905 | IPR011990 | GO:0005515 | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 326 | 390 | - | - | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 888 | 902 | - | - | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 882 | 902 | - | - | |
| Pste5g00125 | 1227 | MobiDBLite | consensus disorder prediction | 463 | 488 | - | - | |
| Pste5g00125 | 1227 | ProSiteProfiles | dnaJ domain profile. | 912 | 1009 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste5g00125 | Pste-Chr5 | 964422 | 976881 | Transposed |