Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00124 ATGGGTGCTACGGGCACAGGCAAAACGAAGCTTTCTATAAACTTAGGCACTGAATTCCCTTCTGAAATAATAAACTCAGACAAAATCCAAGCGTACAAGGGGCTGGACATCATAACCAACAAAGTGGCAGAGTCTGAACGTCGTGGCATTCCGCATCATCTGTTAGGCATCATTGACGACCCTGATTATGACTTCACCATTGATGAATTTTGCAACCGTGTCCTCGCTGCTCTTGATCTCATCATAGGAAATGGACACCTACCAATCATCGTGGGAGGCTCAAACACTTACATTGCAGCATTGCTTGAGGACCCCAACATTGCATTTCGTTCCAAATATGATTGCTGCTTTATTTGGATTGATGTGTCTTTACCTGTGCTATTTCAGTATTTAGATAAAAGGGTGGATGAAATGCTAGATGAAGGAGTTGTGGATGAGATTCGACAAGCTTTTGTGCCTGGGGCAGATTACACCTGCGGAATTCGAAGAGCCATTGGAGTTCCTGAGCTAGGAGACTATCTCCTGATTGAGAAGGAAATAGGTTATGACGAGGCTCAAAAGGAGAAGATGCTTCAACATGCCATTGCCAGAACCAAAAACAACACTTGTAACTTGGCTGAGATGCAACTCTTAAAGATCCATAGGATCAACTATGAGCTTGGATGGAAAATGAACAAAATTGATTCCACACAAGTGTTTCAAGCTCTTTTAAATGGAATCGACTACAACCTCCTTTACCAAGATGTTGTGCTCAAACCAACCATCCAGATAGTCAAAACATTTCTGGAGGATATCACTCCAGAAGGGACAGGAAAGACATCACACCAAAACGATCAACACATGATTTCTGCTTCAAATTCACATCATTGA 870 0.423 MGATGTGKTKLSINLGTEFPSEIINSDKIQAYKGLDIITNKVAESERRGIPHHLLGIIDDPDYDFTIDEFCNRVLAALDLIIGNGHLPIIVGGSNTYIAALLEDPNIAFRSKYDCCFIWIDVSLPVLFQYLDKRVDEMLDEGVVDEIRQAFVPGADYTCGIRRAIGVPELGDYLLIEKEIGYDEAQKEKMLQHAIARTKNNTCNLAEMQLLKIHRINYELGWKMNKIDSTQVFQALLNGIDYNLLYQDVVLKPTIQIVKTFLEDITPEGTGKTSHQNDQHMISASNSHH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00124 289 Gene3D - 1 262 IPR027417 -
Pste5g00124 289 MobiDBLite consensus disorder prediction 268 289 - -
Pste5g00124 289 FunFam Adenylate isopentenyltransferase 5, chloroplastic 124 224 - -
Pste5g00124 289 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 124 224 - -
Pste5g00124 289 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 262 IPR039657 -
Pste5g00124 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 179 IPR027417 -
Pste5g00124 289 Pfam IPP transferase 111 210 - -
Pste5g00124 289 Pfam IPP transferase 30 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00124 Pste-Chr5 952814 953683 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00124 78 274 C2H2 Transcription Factor Family AT2G27760 32.883 3.76e-22 94.0