Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00105 AGCAAATGTTAATGTTTAAGTATGAAGTATGAACTCTTTTCCTTTGTCTTAATTTTTGAGCTTGGGTTTAAGGTTGTGGCGCCGAGGCTACCTGACTGTCACTCACCCACGTGACTCGAGTCCTTTGCCTTGTTAATGGTTGCTTTCTTTCTTCTTAATCTTAGCTAAGATGAAATTGATGAGCAGAGGCTAGCTTGGGTCTGTGCCGTCAAGGTGTTTCATCAAAATGACTCTTTTGCTCCGTCTTGGTCTCCATATATTGCCTCGGCCTTTACTCTCCTCCTTCTGCCAGAATAGTGGTAGAGAAATAATCACCAGGATTTGCAGGAATACCTGCTTCCTCTCTTCTGCAGCTGAAGCCTCAGATTTAGAATGTGATGTGACCCATGATGATGTCAAAGCAGAAGAGAAAAATAATGCACTTTGCCAGGCTGTCTCACAGCTTGCTAGCGAGTTTAGCAAGGAATCAATGTTATCTTTGCAGAAGTTTTTTGGTGTACGGCGTGCTCATGTGATATCTACAGGCTCATTGAAGCTTGATCTAGCTCTGGGAATTGGAGGATTACCAAAGGGTAGGATTGTGGAAATTTATGGACGAGAAGCAGCTGGTAAGACTACACTTGCACTTCAGATTATTAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAATGCACTGGACTTCACACTTGTGGAATCGATGGGAATAAACACTGAAAACCTTCTTGTATCTCATCCTGACTGTGCTGAAAATTTGTTAAGTATGGTTGACACATTAACAAAAAGTGGAGCTGTAGATGTAATTGTGATTGATAGTGTTGCTGCCCTTGTCCCCAAATGCGAACTTGATCAATTAGGAGTTAGCACTAAACGAGATTTACAATCACGAATGATGACTCAAGCACTGCGGAAAATTCACTATTCATTATCTCATTCTCGAACTCTCATTGTTTTCATTAATCAGATTAGATTGAGCCCAAAATCAGTTAAGGAATGTGGATCTGTGGAAGAAGTTACTTGTGGTGGAAATGCCTTGAGATTCTACGCAGCTGTTCGTTTGAGACTTTCAAGATTGAGATTGATCAAAATTGAAGATAAGGCAGAGGGTGTTCTGATCTGTGCACAAGTGATAAAAAATAAACTAGCACCAGCCGCAACTAAAAGGGCTGAATTGGTTATCAAGTTTGGAAGAGGCTTTTGCCATGAGTCAGAGGTCTTAGATTTGGCTTGTGAACATGGAATCATTGTGAAAGATGAGGAAAGCTACTTTATTGAGGGGGTGAGTTTTGACAGTAGAGAAGAAGCTGAACTGTATTTGGCTCAAAATGATGCCGTTTGTGACAAGTTGGTTACGGATATGAGAAGACTTAATTACTTTTAAAATCTGGTGGACCTTTTAATATCTTCCTATAAACTTGCGCAGCAGCATGAATTTACTAGGCCAAGTTTCTTTCAGTGGTATGCCCCTTTGTGTAATTGATCATTGCCAACTAACATTGCCTTCAGTGGGTATCAACCATTCCACAGCAGACAGCACTTAAAGTTACAGGAATTTCAGATGCTTTAATTTCAGTCCCTTGGATCTAGGTATGGAATACTGCAAAATTACACTACCAAATGAGAAATTCGATTGCTATTGCAAACCATTTGACACCTTTCTGTGTATTAATAGGGACTGGTGGTTATATTAATGTCAGAAACATGTCAATTATGGAACTGCAATGTAAATGAACTGTCCTCATTTCTT 1762 0.3984 MTLLLRLGLHILPRPLLSSFCQNSGREIITRICRNTCFLSSAAEASDLECDVTHDDVKAEEKNNALCQAVSQLASEFSKESMLSLQKFFGVRRAHVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLALQIIKEAQKLGGYCAYLDVENALDFTLVESMGINTENLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKCELDQLGVSTKRDLQSRMMTQALRKIHYSLSHSRTLIVFINQIRLSPKSVKECGSVEEVTCGGNALRFYAAVRLRLSRLRLIKIEDKAEGVLICAQVIKNKLAPAATKRAELVIKFGRGFCHESEVLDLACEHGIIVKDEESYFIEGVSFDSREEAELYLAQNDAVCDKLVTDMRRLNYF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00105 389 ProSitePatterns recA signature. 274 282 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pste5g00105 389 PANTHER RECA 44 385 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 SMART AAA_5 115 289 IPR003593 GO:0016887
Pste5g00105 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 319 IPR027417 -
Pste5g00105 389 Gene3D - 92 388 IPR027417 -
Pste5g00105 389 PRINTS RecA protein signature 185 214 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 PRINTS RecA protein signature 271 299 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 PRINTS RecA protein signature 151 180 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 PRINTS RecA protein signature 223 252 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 PRINTS RecA protein signature 358 375 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 Pfam recA bacterial DNA recombination protein 65 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 ProSiteProfiles RecA family profile 2. 263 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Pste5g00105 389 CDD RecA 96 331 IPR013765 GO:0003697|GO:0005524|GO:0006281
Pste5g00105 389 ProSiteProfiles RecA family profile 1. 93 252 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00105 Pste-Chr5 833162 838839 Transposed