Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00075 ATGTTATTATGTAGGCGAGAAACAGAACTCATTGAAGAAATTGTTGCAGAGGTATGGAACAGGTTACAACCTAAATTGCCATCCTATGATGATGATCTGGTTGGAATTGATTCAAGGGTAAACAGTCTTTATTCACTTCTAAGAACAGAATCAGAGGAAGTTCGCTTTGTGGGGCTATGGGGGATGGGTGGCATAGGAAAGACAACACTAGCCAAATTTGTCTTCAATAAAATCCATAACCAATTTGATATTAGTTGCTTTCTTGAAAATGGAACTGAATCCATTCAAGCTGTAGTTCTAAGTCTACCTGAGCCTTATGAAGCACAATGGCATCCTGATGCTTTCTCAAAGATGAGTAATCTTAGCCTGCTCATGATATTAAATAAATTGCACCTTCCACTTGGTCTCAATTGTCTTCCCAGTGGATTAAAAGTTCTTGCATGGGAGGAATATCCTCTTGAATCACTGCCAATTGAATCTCAACTGGATAATAGGAAAAGTAACAATCTTTGGAGAGGAACAAAGTTTATGGGAAATTTGAAGAGCATCAATTTGAGAAATTCCAAAAATCTGCATATTACTCCAGATTTCAGTAGAATTCCAAATCTTGAAGAATTGATTCTTGAAGGTTGCATAAACCTAGTTGAAGTTCATGGATCTCTTGGACTTCTTCAAAAGCTTTCATATGTGACGTTTAAATGTTGCAAAAATCTCAAAATCCTTCCAAGAAAATTTGGAATGGATTCTTTAAAATGTCTAATTTTATCGGGCTGCCCAGCAGTTAGAGAGCTTCCCGAGTTTGGGGAAAATATGAAAAATCTATCCATGCTTGCTTTGGAAGGGACTTCCATAGCTGAACTACCGGTGTCTGTTGGTAATTTGAATGGTCTTAATGACTTGCTTTTAGAGGGTTGCAAAAAAATTGTTTGCCTTCCAAACACCATTTCTAATTTGAAATCTCTCAGCAGGCTCAATATCTCTGGTTGCTCAAATTTTTCTAAGCTGCCTGATAATTTGAATGAAAATGAGGCTTTGGAATATTTAAATGCAAGTGAAACTTCTATTAGGGAAGTTCCTTCATCCATTGTGCTTTTAAAGAATCTTAGGCTGCTCTCATTTCGTGGATGCAAAGGACTATCATCAAACTCACGGAGCTCATTTTTCCCTTTTCAGAACATTTTCCGGTTTAATAGTCCTCCAACTCCAAATAGATTAATCTTGCCTTCTTTCTCTGGTCTATCCTCATTGGATAAACTAGACTTAAGCTATTGCAATCTCCCTGATGGATCAATTCCTGACGATCTTGGCTGCTTATCATCATTGATAACATTAGATCTAAGTGGGAACAATTTTGTACACCTTCCTACTGGTTGTATCTCTAAACTTTTGAAGCTAGAAAAACTTTTACTGAAGTGTTGCCCAAACTTGGAGTCATTTCCAAACCTGCCTCCAAATGTACATCATGTAAATGCAAGTGATTGTGGTTCAATGAAACCTTTATCAGATCCACGACAGATACGGGGTCACTTGGCATCGTTTGCCTTTGATAAGTTGCAAGATGCCAATCAGCTTAAGACCTTACTGGTAATTCCAGGAAATGAAATTCCATCATCTTTTTTCTATCAAAAGTATCTCGACCAAGTCCAAGACATAGAATACTTGAAAAAAAACTACATTTGGGCTGATTCCACTGTGTCAATATCGCTGGACTTAGCTCAGCTTCGTCACCAGTACAGTAAAAGTGAATGGTGGGGAATTTTGGTTTGTCTTGTTGTAGAGGATGTGGAGTCTTCACCTTCAGAGGAGTATCGCATTGGTTGGATTTCAAAAGTTCCTAGTTTCAAAAATATTTTGCATCAGCTGTTGCACAAGTTGGAGACGGGATTCGTCTCTGGAATCCCAAGTCATAAATATCCTCACTTGTTGATTTTATATATTCCTTCGACCTACTGGTTCTACGTTCAAGACAAGTTTCAATTAATATTTTATAGTTCCAGTCTTAAGAGCAAACTAGTAATAAAAAAATGTGGATGGCGCACATTACGTAAGGAAGATGCTGAAAACTGGCGCAGAAAACTGTCTGAATGCGCCACTGCTTTTGCCAAGCAATGTGTTCCAAGGCCAAGTGGGGGTACCTTACCTCCTCATCTCTCACCTTGGATATGGATAAGCGATCTCAAGGTTCCCCAGCATTGCAAGACTTTCCTCTTGGCTATCCTGTGTGATCGGTTACCTGCTCATGCAACGTGCAAATTCTGCAGCTTGGAAGGGACTGTGATCCATGTTTTACGAGACTGTACACGAGCCACTTCAATCTGGGTTCAAATGGTTCCTCCTGAGGTGCGTGATGAGTTTTTTTCAACATCTCTTCGTGATTGGATGCATAGGTTCCTTCAGAAACCCTGGTTGCCCGACAGGGACTATGATGCTGACTGTTTGAGGTTTACTGTCACAGCTTGGCTGCTCTGGAAGGATACAACTAGTTCCATCTTTAAGGGAACAGATACTGATGGCTTGTATTCTATGATTCAGTCTCTGGTAAAAGAATATACAACGCTTTTGCATGCGAAAGGGGAAGAGGGTAGTTCTGGTGGGAGTTCCCTCTCCCAGAGCTCACGTCTAAAACAATTTATTAAGTTGAACGTGGATTGCTGTTGTACGGCCAACCCGGGTTATGGGGGTCTCTTTCGTGATGTGGAAGGCAAGTGGCTTGGTGGGTTCTATGGAACTCGCGGCTTTACAACAAACATGGAAGCTAAACTTTATGCCATTTGTCAGGGTTTGATTACAGCTTGGGATTTGGGTTACAGAACTGTGCTGCTTGAAACTGATTCATCAGAAGCAATAAATCTCATTGAGAAAGCCAATATTGAGGAATGTGCCTATGGTAGCTTGGTTGCTGACATACGGTGCTTGAAGCAAAGAGATTGGTCCCTTGATTTGATCCATTCTCTGAGAAAAGACAATGCATGCGCAGGCATTTTAGCAAAACTTGGAGCAGAGCAGCATCAACTATATTGCTTCCTGGATCATCCACCAAAGCAGCTTCAGCCGGCACTGGTGGCTGATTCCCTGCAGGTTCAGCTTCCTTGTCCATAA 3099 0.4053 MLLCRRETELIEEIVAEVWNRLQPKLPSYDDDLVGIDSRVNSLYSLLRTESEEVRFVGLWGMGGIGKTTLAKFVFNKIHNQFDISCFLENGTESIQAVVLSLPEPYEAQWHPDAFSKMSNLSLLMILNKLHLPLGLNCLPSGLKVLAWEEYPLESLPIESQLDNRKSNNLWRGTKFMGNLKSINLRNSKNLHITPDFSRIPNLEELILEGCINLVEVHGSLGLLQKLSYVTFKCCKNLKILPRKFGMDSLKCLILSGCPAVRELPEFGENMKNLSMLALEGTSIAELPVSVGNLNGLNDLLLEGCKKIVCLPNTISNLKSLSRLNISGCSNFSKLPDNLNENEALEYLNASETSIREVPSSIVLLKNLRLLSFRGCKGLSSNSRSSFFPFQNIFRFNSPPTPNRLILPSFSGLSSLDKLDLSYCNLPDGSIPDDLGCLSSLITLDLSGNNFVHLPTGCISKLLKLEKLLLKCCPNLESFPNLPPNVHHVNASDCGSMKPLSDPRQIRGHLASFAFDKLQDANQLKTLLVIPGNEIPSSFFYQKYLDQVQDIEYLKKNYIWADSTVSISLDLAQLRHQYSKSEWWGILVCLVVEDVESSPSEEYRIGWISKVPSFKNILHQLLHKLETGFVSGIPSHKYPHLLILYIPSTYWFYVQDKFQLIFYSSSLKSKLVIKKCGWRTLRKEDAENWRRKLSECATAFAKQCVPRPSGGTLPPHLSPWIWISDLKVPQHCKTFLLAILCDRLPAHATCKFCSLEGTVIHVLRDCTRATSIWVQMVPPEVRDEFFSTSLRDWMHRFLQKPWLPDRDYDADCLRFTVTAWLLWKDTTSSIFKGTDTDGLYSMIQSLVKEYTTLLHAKGEEGSSGGSSLSQSSRLKQFIKLNVDCCCTANPGYGGLFRDVEGKWLGGFYGTRGFTTNMEAKLYAICQGLITAWDLGYRTVLLETDSSEAINLIEKANIEECAYGSLVADIRCLKQRDWSLDLIHSLRKDNACAGILAKLGAEQHQLYCFLDHPPKQLQPALVADSLQVQLPCP 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00075 1032 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 94 IPR044974 GO:0006952
Pste5g00075 1032 Pfam Reverse transcriptase-like 888 997 IPR002156 GO:0003676|GO:0004523
Pste5g00075 1032 ProSiteProfiles RNase H type-1 domain profile. 874 1001 IPR002156 GO:0003676|GO:0004523
Pste5g00075 1032 CDD RNase_H_like 880 997 IPR044730 -
Pste5g00075 1032 PRINTS Disease resistance protein signature 56 71 - -
Pste5g00075 1032 PRINTS Disease resistance protein signature 316 332 - -
Pste5g00075 1032 Gene3D - 877 1002 IPR036397 GO:0003676
Pste5g00075 1032 Pfam NB-ARC domain 44 88 IPR002182 GO:0043531
Pste5g00075 1032 SUPERFAMILY Ribonuclease H-like 877 1004 IPR012337 -
Pste5g00075 1032 Gene3D - 19 131 IPR027417 -
Pste5g00075 1032 SMART LRR_typ_2 413 437 IPR003591 -
Pste5g00075 1032 SMART LRR_typ_2 438 461 IPR003591 -
Pste5g00075 1032 SMART LRR_typ_2 271 294 IPR003591 -
Pste5g00075 1032 Gene3D Ribonuclease Inhibitor 137 310 IPR032675 -
Pste5g00075 1032 SUPERFAMILY L domain-like 97 498 - -
Pste5g00075 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 93 IPR027417 -
Pste5g00075 1032 Gene3D Ribonuclease Inhibitor 311 394 IPR032675 -
Pste5g00075 1032 Gene3D Ribonuclease Inhibitor 395 684 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00075 Pste-Chr5 632595 636763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00075 5 90 WRKY Transcription Factor Family AT4G12020 38.372 1.06e-09 60.8