Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00072 CTTCTCCGCGAAGTTAAACCAAAACTCGAAAACAGAAAGAAACATGGCGCCAAAACGAAAACCTTCGTCTCTATTCTCCATCGGTAACTGCGAGATTACGGTCGATGTCAACCGCTTCACCTGCAACTCTGATTCAAACGGCGTTGTAATCTCTCTTCCTCGAAACGGAAAGATCAAAGTATCAGCAGTGGCTGCAAACCGTGGAAGCGCTTCTGAGGATTTTAGGTCCGATGATAAAGAACACGAGTTCGTGCTGGTTAATCCTAAGGATATTGATGCTATGTACACGACAGAGCTACCTGGAATGAGTTATGCTGCCAATACGGGAAAACAATCAAAGTTTCTTGAGAGATGTGTAACTAATGGGAAATATCGAACACTACTTATGAAATCCTCTTGTCTTGGAAATGCAGGGAAGGTTATAGCTGCAATTACATTCCAAATCATACCTGCAGATACAGAATATGCAGAGATCCCACTTGCGGCCGTCAATGCAATCTATCAACAGAAGGGTTTTGGTCATCTATTGTTTTTAGAGCTAAGGAAGAGACTTCAAGGTGTTGGTGTTCGTTCTATTTTATGCTGGGGAGATGAAGAATCAGGAGGATTTTGGCTTAAACAGGGTTTTGTAGAAATAGCAAAGGTGGATACCAAAGGAAGGGCCCGCAGGTTACCTGTAAAAGCTGATATTCAAAAATCTTTATGCTTTCTTGGTGGTTCAACTCTCATGGTTTGCCACCTAAGGAAAGAATTCTTAGCTGATGATGCTAACACTGTGAAGGATCTCCCATCACAGTTTGATAAATCTTCTCATGGAACAGAATCAGGTAAAAGTCAACATGAAGCTTCGGTGAAAGATGGATCTTCAACAGAATATGAGAAACTCAGTGGATTTGGCAGTCAAAATTCCAAGCAATGCTGCAGTGCTATTGCTCCTTTTGCCAGATTGAATAACGATAGACAGGCCAGTGGCTCAGAAAGTTTACATGATGGACTGGATGCTAATGCGAAGTATTGTTCTCAATCTTCAAAAGGTGCAAAGAGGGCCTGGGAAGCCTCTTTATCCTCATTGAAGTCAAAAAGGGTGAAGGGGAGTCAGATGGTTGACTACCAATCGGATTCTAACTGTGGTTTTATCTTAGAGACTGATAAGGGCAATCCTTGTTTTGGAGAAGTCCCTCATGATCCTTCAATTACAAAAAGTTCTGAAAAATGTAATGGGGATTCTTTGCATTTAGAAGCTCCTATCAATATAGAATTACCATCATCTAAACAATGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTCACAAAGGTGATTGAAGACCTTGGTGGAACTATATCTCATGATGGAAGTATGACCACACACGTTGTCACTGGAAAAGTGAGGAAGACCCTGAATTTCTGTACCGCCCTTTGTTCAGGTGCTTGGGTGATCTCATCATGTTGGTTAAAAGAAAGTTTTCGTGAAGGCAGATTTGTTGATGAACTGCCTCACATACTGAATGATACGGATTATCTGTTGAAGTACAAATCTGATTTAAAAAGTGCAGTTTTCCGCGCTAAAGCTAGTCCTCATGCTTTATTCAAAGGTTATAATATATGCATTGCAGCTCATGTTCAAACTCCTTGTAAAACATTGTCTGCAATTGTCAGGTCCGCAGGTGGTAATGTTATCACTCGACTTGAAAAGGTAGACGAAGCATCAACTACAATCTTTGTGACAAGCGAAGAAGACACAGAGGAAGCAATGATAGCTGCAAAGAAAGGTATACGGACTTTCAGTAGCGAGTGGTTTATGAACTGTGTCTTGAGACAAGAGCTTGACTTGGAGGCCCCCCAGTTTACAGAGTCCTTATAAGGATGCGACATGGTCAGTGAACTATATGATTTTGGTATATATG 1925 0.4099 MAPKRKPSSLFSIGNCEITVDVNRFTCNSDSNGVVISLPRNGKIKVSAVAANRGSASEDFRSDDKEHEFVLVNPKDIDAMYTTELPGMSYAANTGKQSKFLERCVTNGKYRTLLMKSSCLGNAGKVIAAITFQIIPADTEYAEIPLAAVNAIYQQKGFGHLLFLELRKRLQGVGVRSILCWGDEESGGFWLKQGFVEIAKVDTKGRARRLPVKADIQKSLCFLGGSTLMVCHLRKEFLADDANTVKDLPSQFDKSSHGTESGKSQHEASVKDGSSTEYEKLSGFGSQNSKQCCSAIAPFARLNNDRQASGSESLHDGLDANAKYCSQSSKGAKRAWEASLSSLKSKRVKGSQMVDYQSDSNCGFILETDKGNPCFGEVPHDPSITKSSEKCNGDSLHLEAPINIELPSSKQCFRIMLMNIADDAKKTQLTKVIEDLGGTISHDGSMTTHVVTGKVRKTLNFCTALCSGAWVISSCWLKESFREGRFVDELPHILNDTDYLLKYKSDLKSAVFRAKASPHALFKGYNICIAAHVQTPCKTLSAIVRSAGGNVITRLEKVDEASTTIFVTSEEDTEEAMIAAKKGIRTFSSEWFMNCVLRQELDLEAPQFTESL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00072 612 MobiDBLite consensus disorder prediction 249 272 - -
Pste5g00072 612 ProSiteProfiles BRCT domain profile. 517 601 IPR001357 -
Pste5g00072 612 SMART BRCT_7 405 484 IPR001357 -
Pste5g00072 612 SMART BRCT_7 519 599 IPR001357 -
Pste5g00072 612 Gene3D BRCT domain 405 518 IPR036420 -
Pste5g00072 612 CDD BRCT_PAXIP1_rpt6_like 521 602 - -
Pste5g00072 612 ProSiteProfiles BRCT domain profile. 415 494 IPR001357 -
Pste5g00072 612 Gene3D - 41 236 - -
Pste5g00072 612 SUPERFAMILY BRCT domain 456 602 IPR036420 -
Pste5g00072 612 Gene3D BRCT domain 519 611 IPR036420 -
Pste5g00072 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 202 IPR016181 -
Pste5g00072 612 CDD NAT_SF 122 181 - -
Pste5g00072 612 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 72 272 - -
Pste5g00072 612 Pfam BRCA1 C Terminus (BRCT) domain 520 596 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00072 424 552 Core DNA Replication Machinery Family AT4G02110 23.188 3.75e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00072 5 619683 625875 Pste5g00072 5 619683 625875 ECH