Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00031 CGGACACGGACACGGCCTAACGCTACCTTGTTTTGTTTTAACTGCTACACCATGTCCGCTTTCCACACGCCCAGATTGGTTCTCAAAAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTCAGAAGAGCCATTGGAAGGAGCGACTTGAACAACTTGGATCCCTTTCTAATGTTGGATCACTTCTCAGTATCTCCCCCTGCAGGATTTCCTGATCATCCTCACAGAGGTTTCGAGACTGTCACCTACATGCTAGAGGGAGGTTTAACTCATCAAGATTTTGCTGGACACAAGGGTACAATAAGATCCGGTGATGTTCAGTGGATGACTGCAGGCAGGGGAATAATTCACTCTGAAATGCCTGCAGAAGCAAGCAACAACAAGGGATTGCAACTGTGGATCAATTTATCAGCCAAGGACAAAATGATCGAACCTAACTACCAAGAGCTTCCTAGTGAGAACATACCAACAGCAGAAAAAGACGGGGTCCAAGTGAGGGTGATAGCAGGAGAAGCAATGGGAGTGCATTCGCCTGTGTACACGCGAACTCCAACCATGTACCTTGTTTTCTCCATGATGCCTGGAACTGAGTGGCATCAGACCATTCCAGAGTCGTGGAATTCCTTTGTTTATGTGATTGAAGGGGAAGGAGTATTCGGGTGTCCAACTTCATCCCCAACCGCGCCACACCATGTCCTTGTTTTCACTCTTGGCGATGGCCTTAGCGTATGGAACAACTCTTCAAAGCCTCTCAAGTTTGTTCTCATTGGAGGCCAACCACTTGACGAGCCAGTGGCTCAGTATGGCCCTTTTGTCATGAATACACAGTCTGAAATTGAGAAAACCATTGAAGACTATCACTATGGCAGGAATGGATTTGAGATGAGGAAGTATTGGAGCTCTCAATAGTAGTCATAACTTGCAACTCTCTCTGTCAATCTCTCATAGTGAAATCAATGTTATGTGTATTAGATCAAATAAGAAGCCTGTTTTCTCAATCCTTTTCACTGTCACAGGCGTAGCTATCAAAGTAGTAGGAGCTGAAAAACAAATATTGCTTATTCTATCTTTTTCCTTTCTAATTCTATGTACCAAAAGCTTCTAGAATATTAAAATTGCTGCCGGGACAACTATTGGTTGTGGCTTAAGTCATGATGGGTCAGCTTATCTTCATTTTTTTCTCACTACATTTCTTTCTTTCTTCAGATCTATTCGTGTTTTAGGGTATTTGATATCGTAGAGTGATACAAAAC 1262 0.4342 MSAFHTPRLVLKKVLAKSQHEGDGAVVRRAIGRSDLNNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGLTHQDFAGHKGTIRSGDVQWMTAGRGIIHSEMPAEASNNKGLQLWINLSAKDKMIEPNYQELPSENIPTAEKDGVQVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPGTEWHQTIPESWNSFVYVIEGEGVFGCPTSSPTAPHHVLVFTLGDGLSVWNNSSKPLKFVLIGGQPLDEPVAQYGPFVMNTQSEIEKTIEDYHYGRNGFEMRKYWSSQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00031 288 CDD cupin_pirin_C 170 246 - -
Pste5g00031 288 PIRSF Pirin 6 286 IPR012093 -
Pste5g00031 288 Pfam Pirin C-terminal cupin domain 173 278 IPR008778 -
Pste5g00031 288 Pfam Pirin 27 120 IPR003829 -
Pste5g00031 288 SUPERFAMILY RmlC-like cupins 8 286 IPR011051 -
Pste5g00031 288 CDD cupin_pirin_N 25 122 - -
Pste5g00031 288 FunFam pirin 21 156 - -
Pste5g00031 288 Gene3D Jelly Rolls 142 247 IPR014710 -
Pste5g00031 288 PANTHER PIRIN-RELATED 4 287 IPR012093 -
Pste5g00031 288 Gene3D Jelly Rolls 21 273 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00031 Pste-Chr5 325077 326838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00031 6 283 Calmodulin-binding Proteins AT3G59220 62.500 9.84e-129 365