Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00023 ATGGGTTGCTTCTCCTGTTTCGATTCGAGTTCCAGGGACAGGGAGGACGACCACAACCTCCGTCCTCAGCAACAGCAACCCCTTCCTTCTCAGATTTCAAGATTGCCCTCTGGAGCAGACAAGCTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAACCGCCTCCTCCCAAGGATGGACATGGACCTTCCGTCCAAATTGCTGCCCAAACATTCACTTTCCGTGAACTTGCCGTCGCAACCAAAAACTTCAGGCCAGACTCCTTTGTCGGTGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGACTTGAAACCACTGGTCAGATTGTTGCTGTCAAACAGTTAGACAAAAATGGTCTTCAGGGTAACCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTACATCATCCTAACCTTGTCAATCTCATTGGATACTGTGCGGATGGGGATCAACGCCTCCTTGTTTATGAATTTATGCCGTTGGGATCATTGGAAGATCACCTTCATGATCTTCCGCCTGATAAAGAACCACTAGATTGGAACACTAGAATGAAAATAGCTGCAGGTGCTGCAAAAGGATTAGAATACTTGCATGATAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGTTACCACCCAAAGCTTTCTGACTTTGGGCTTGCAAAACTTGGTCCTGTTGGTGACAAATCTCATGTTTCTACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCCGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTTGTCTTCTTAGAGCTGATCACTGGCCGGAAAGCAATTGACAGCACCCAGCCCCATGGAGAGCAGAATCTTGTCACATGGGCACGTCCACTTTTTAACGACCGCAGGAAATTTTCGAAGTTGGCGGATCCCAAGCTGCAGGGGCAGTTTCCCATGCGGGGTCTTTACCAGGCTCTAGCTGTGGCATCAATGTGCATTCAAGAATCGGCTGCTACGCGTCCTCTGATTGGTGATGTGGTGACTGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCCAACAATGCTGGGCATGGTTATAGGGGGTCTAGTGATGATAAAAGGAACAGAGACTATAAAGGTGGAAGAATATTGAAAAATGATGAAGCTGGGGGATCTGGACGAAGATGGGATTTGGAAGGATCAGAGAAAGATGACTCCCCACGAGAAACTGCAAGGATGTTAAACAGAGATCTAGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTAAGACAAAAAAGAAAACAAAGTTTGCAGCAGGGCAGTCTTGATGGTTCTAACGCTTAGTATCCCATCTTGGTTGCTTAATTTTCTACCTTGAGGCTATGGGGAGCTTATCATTGAGCTGATCTCAAATAGCCATTAAAACAAATTATAGGTTCTAATTATCTGCCTGACAGCCATTTCATGCAATGGCTGCAACTTGAATGAATCTCATAACAAAATCTTTTCTAACATAACCTTTTTGCCACTGTGTTTCCCTTTTTTTTCTGTACTTTCCGCCTACTGAACAAGAGCATAATGGAAACTGTACATTTTCTCCTGGAACCAGTCATGGTCAGAACACCCTTAAGTTTTCTCAAAATCGCTGCTGTACACATACATAATGCTTCTCCAATATGTCTATGGCAATCTCGGTATCTGCTATAATTATTATCAACTAATTTGTAATGATAGTAATTAAAGTAGCTTACTCTGGCTTGTAGTGGAAGATTTTGAAGTTTTCGTCCTTTACTTCCTGTTTGGTTCGGCCACTGTAGCAAATAAAAGAGTGGAAATTTTTAAAAATTAGTGTGGATTTTGTACCTAGACCACTTTAATATTTGTACTCAATCTCATTTTATTTTATTATACTCAACTCTATCAAATATACCACTAGTGAAGAGTCTGTACAATTGCCATTTCTTTTTTTTTGGTACAAGTCTCCGCTTAGAAAATATGATCGGGTTGGGATGTCTCTTAGAATCAATCATATAATGAGGTATTCTGTTTTGAAGTTGAAAGAGAGGGTCTTTGGATGATCCCTGCTCCTTTTCAGGGTTTCTGTTATAAACATTCTCATAAGATTTT 2169 0.4255 MGCFSCFDSSSRDREDDHNLRPQQQQPLPSQISRLPSGADKLRSRSNGGSKREPPPPKDGHGPSVQIAAQTFTFRELAVATKNFRPDSFVGEGGFGRVYKGRLETTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPKLQGQFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNAGHGYRGSSDDKRNRDYKGGRILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLRQKRKQSLQQGSLDGSNA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00023 461 MobiDBLite consensus disorder prediction 369 426 - -
Pste5g00023 461 MobiDBLite consensus disorder prediction 438 461 - -
Pste5g00023 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pste5g00023 461 Gene3D Transferase(Phosphotransferase) domain 1 161 375 - -
Pste5g00023 461 FunFam Serine/threonine-protein kinase PBS1 161 375 - -
Pste5g00023 461 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00023 461 SUPERFAMILY Protein kinase-like (PK-like) 68 356 IPR011009 -
Pste5g00023 461 Gene3D Phosphorylase Kinase; domain 1 68 160 - -
Pste5g00023 461 PANTHER OS07G0668900 PROTEIN 3 370 - -
Pste5g00023 461 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Pste5g00023 461 MobiDBLite consensus disorder prediction 1 64 - -
Pste5g00023 461 FunFam Serine/threonine-protein kinase PBS1 58 160 - -
Pste5g00023 461 MobiDBLite consensus disorder prediction 445 461 - -
Pste5g00023 461 MobiDBLite consensus disorder prediction 376 426 - -
Pste5g00023 461 Pfam Protein kinase domain 88 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g00023 461 CDD STKc_IRAK 90 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00023 Pste-Chr5 254852 266234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00023 1 361 Glycoside Hydrolase AT3G07070 63.957 3.32e-167 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste5g00023 Pkinase 5.8e-46 CL0016