Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00015 CAACAACCTAAAATATATTCACTAAGATTTATTTCTTTATTTTATTCATTAATTATTTGTTCTTAGTCTTTATCTTATAATTTTCCATTGCTTGCCCGGTAATTCAAGATCAACTTGGAAAATTTGCAAGATTTGGGATGAAATCTGGTCGGATCTTGCTTTGTGGGATGGGGATTTTGGTGGGTCTTATTTCAATACAAAGCTCTTCCTCTTCTTCTTCCAATCCCATCTCCCTCCACCTCTCGTAACACATAAACAATAACCTTTCTCCTCTTTTTCAATTCTTTGTTTCTTCTTCTTCTCTTTCAATCCTTTTTCTCCTTTCTACAAATGGGGATGGCTGCAGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGCCTCATAGATAGGAAACTCATTGAAAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGTGTGAGAATGATGAGAGCAACCCAAATACACCATCTGTTTGTCCTAACAATCATCAGGAGGTAGAGGTGAATCTTGTCATAACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTAATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCAGTGAGGCTGTCAGATTTGAACAAACTTAAACCCCATATGAAGAAAACCAAGTTGAAAGATGAAAAGCTAGAAATAGTAGAAAAGCTTGAAAACTCAGAAGTTCAACAGCAACATCCACAACAAAAAATCATCCAAAATGACCAGCAACAAGCACCAAAATCCCAAGATCCTTGTCAGCCAGAGTCAGAGTCACATCCACAACCAACTATAGAACAACAGCAACAAACACTACAACAAGCCAACAATAACAAGAGGAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCTACTGTGGTATGATCATAAATCATTGGCAAATAATTTTCTTAATTTTCAAAATGTAATTCTTATATAACTTTTTTTTTTATTTTTAAAAAAATTAACTTCATGTTGGTTAATATAGGCTCTATAGGAGTGTAGTAGAGTTATTTCCTGTACACATTTTCCTGGAAATATTTCCTTCCAATTTTGCTTCCCCAATATAATGAAAAAGGAAAAAAATATTGAATTGAGTA 1274 0.3658 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLCENDESNPNTPSVCPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDEKLEIVEKLENSEVQQQHPQQKIIQNDQQQAPKSQDPCQPESESHPQPTIEQQQQTLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00015 242 MobiDBLite consensus disorder prediction 164 221 - -
Pste5g00015 242 CDD REC_typeA_ARR 11 141 - -
Pste5g00015 242 SMART REC_2 9 142 IPR001789 GO:0000160
Pste5g00015 242 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pste5g00015 242 Coils Coil 202 222 - -
Pste5g00015 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 215 IPR045279 GO:0009736
Pste5g00015 242 Coils Coil 147 167 - -
Pste5g00015 242 MobiDBLite consensus disorder prediction 164 242 - -
Pste5g00015 242 SUPERFAMILY CheY-like 8 153 IPR011006 -
Pste5g00015 242 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Pste5g00015 242 Gene3D - 10 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00015 Pste-Chr5 151474 153565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00015 1 242 Response Regulator Gene Family AT3G57040 65.587 6.22e-103 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste5g00015 Response_reg 1.2e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00015 5 151474 153565 Pste5g00015 5 151474 153565 ECH