Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03459 ATGTTAATCGGAAACATCAAGGTACCTTTGTTTCAGCACATGGACGATCTGGTTCTAGAGAACATCTGTGACCGTGTGAAGTCTCTTATATTCACAAAGGGAGAAATACTAGAGAAGGAGACCAGTTCAGAGAATGCTATTTGTAGTAAGGGTCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGTGTGAAGAGTTGCTGCATGTTAGGGCCAGGAAACTTCAGTGGTGACGAGCTCCTTTCATGGTGTTTAAGGAGACCCTTCATAGAACGCCTTCCACCATCATCATTCACACTCATTACATTGGAAACCACAGAGGCATTCGGACTTGATGCTGAGGATGTGAAGTATGTGACACAACATTTCAGGTACACGTTTGTGAAGGAAAAGGTGAAGAGAAGTGCAAGATATTACTCACCAGGTTGGAGAACTTGGGCTTCTGTGGCCATTCAATTGGCATGGAGGAGGTACAAGCATAGGTTGACTTTGACTTCTTTGTCTTTTATAAGACCTAGGAGGCATTGTCAAGGTCTTCTTCTATGGGAGAGGATAGGCTTCGCCTCTACACAGCTTTGTTAA 579 0.4387 MLIGNIKVPLFQHMDDLVLENICDRVKSLIFTKGEILEKETSSENAICSKGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLITLETTEAFGLDAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWASVAIQLAWRRYKHRLTLTSLSFIRPRRHCQGLLLWERIGFASTQLC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03459 192 Gene3D Jelly Rolls 8 124 IPR014710 -
Pste4g03459 192 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 162 - -
Pste4g03459 192 CDD CAP_ED 10 114 IPR000595 -
Pste4g03459 192 SUPERFAMILY cAMP-binding domain-like 7 122 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03459 Pste-Chr4 28813493 28815380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03459 7 173 Ion Channels AT5G54250 86.391 2.99e-102 307