Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03434 ATGAGGAAACTATGTGTGACTAAACTTCTCAGCACCAAAAGGGTTCAATCGTTTGCTTCCATTAGAGAAGATGAGTGCGCAAAGTTCATTAAATTGATTGAAAATTCGGTTGGTTCGGAAATGAACCTCACTGGTAGGATTTTCTCATTGGAAATATTTGCTGCTGCAACTGATACTTCAGCATCAACTATAGAGTGGGCCATGACAGAAATGATGAGAAATCCAAGAGTGAGAGAAAGAGCACAAAGTGAGTTAATAAAAGTATTTAGAGGAAAAGAAACCATTCATGAAAGTGATGTAGAACAGCTTACATATTTGAAGTTGGTGGTAAAAGAGACGTTGAGGTTGCACCCACCTACCCCATTATTGCTCCCTAGAGAATGCTCTCAAGTAACCATCATTGATGGATATGAAATACCTATTAAAACCAAAGTCATGATAAATGTATGGGCAATTGGTAAAGACCCTGAATATTGGAATGATGGGGAGAAGTTTATCCCTGAAAGATTTGAGGGTAGTTCTATCGATTTCAAAGGGAATAACTTTGAGTATCTTCCTTTTGGGGCAGGAAGGAGAATATGTCCAGGCATGACATTTGCTTTAGCCACTATAATCCATCCACTAGCTCTACTACTCTATTACTTCAATTGGGAACTCCCAAATAAGATGAAACCTGAGGATATGAATATGGTTGAACAATTTGGATTGGCTATTGTGAGCAAGCAAAAATTGCATTTGATTCCCTTTGTTTATGATGTGTGA 762 0.3793 MRKLCVTKLLSTKRVQSFASIREDECAKFIKLIENSVGSEMNLTGRIFSLEIFAAATDTSASTIEWAMTEMMRNPRVRERAQSELIKVFRGKETIHESDVEQLTYLKLVVKETLRLHPPTPLLLPRECSQVTIIDGYEIPIKTKVMINVWAIGKDPEYWNDGEKFIPERFEGSSIDFKGNNFEYLPFGAGRRICPGMTFALATIIHPLALLLYYFNWELPNKMKPEDMNMVEQFGLAIVSKQKLHLIPFVYDV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03434 253 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 187 196 IPR017972 GO:0005506|GO:0016705
Pste4g03434 253 PANTHER OS08G0105600 PROTEIN 1 50 - -
Pste4g03434 253 FunFam Predicted protein 53 246 - -
Pste4g03434 253 Pfam Cytochrome P450 49 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 Gene3D Cytochrome P450 38 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 44 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 64 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 194 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 107 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 184 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS E-class P450 group I signature 148 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS P450 superfamily signature 108 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS P450 superfamily signature 194 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS P450 superfamily signature 55 72 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 PRINTS P450 superfamily signature 185 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03434 253 SUPERFAMILY Cytochrome P450 49 247 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03434 Pste-Chr4 27636779 27640809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03434 34 248 Cytochrome P450 AT1G13080 48.165 2.46e-69 216