Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03412 AATTTAATATTGTTCCTTACAAATTAAGCATGGTGGTGGTGAAGGGAAAGGTCAGTGATGAACATAGGATTAGAATATTGTATAAGCATTGTCACCCTACAGTGATACATAGAGATATGAACTCTTCTAATATTCTCTTGGAACCAAACTTTAATGCCAAGCTTCCTGTGTGTTGGCAACCACGTACTTATTGGTGGTGGATTCAGCTGTCAGATTTTGGTCTTGCCATAACTGATGGGTCCCAAAGCAAAAAGAACATTAAACTATCGGGTACCATGGGATACGTAGCACTAGAGTATCTTCTAGATGGTAAATTAAGTGACAAAAGTGATGTGTATGCTTTTGGGGTTGTGTTATTGGAGCTCATATTAGGAAGGAAGCCAGTGGAAAAGCTAGCACCAGCTCATGGGATGTGCACTAAATCCTCTAACTTTTACCTTCTAAGAGGCCTATCGGAAGAGGATTCTCTTTCTCTATTTGTCAAATTGGCATTTAAAGAAGGGGAAGAGAAAAAGTATCCACAACTTTTAGAGATAGCAAGAAAGATTGTGAAAAAATGTGGAGGAATACGTTGGCGATGCAAATACTTAAGGTTCTTAGAGTTAAGCAATTCTGAATATGAGAGTTTGCCTCGCTGGATTGGAAAGTTGAAACATTTAAGATTTCTTGATAGTGAAAAACTCAAGAGACTCCCTGATTCAGTATGCAAACTCCAAAATTTGCAAACTTTGGACCTCATGGGATGCACAAGTCTACAAGAATTGCCAGAAGGAATAAGAACACTGATCAACCTTCATCAATTGTTTTTAACCACAAAGCAACTTGATTTACCAAAAAAAGATATTGCAAATTTGACTTCTTTGGAACTTTTATTTCTCTCTGTTTGTGATACATTGGAGTCACTATCAGAAAAGATGCAACTTTCTAGGCTTAAAACTTCGGGTTTTAAAAAATGTGGGACACTAAAGTCTTTGTCATTTAATCTCATTAAAAATGTAGAATATTTTATGATAAATGACTGTTTAAATTTGGATTCGTCAATGGACCATAGCAACCAAATCCCCAATTCAAGTTTAAGTCATCATTCTCTTGTAGGTTTGTCACAGTTGGTCACTTTGCCTCAGTGGTTGCAAGGATGTACGAATACATTACATGTCTTCTATATAGGTTATTGTAAGAATCTTAAGGAGTTTCCTGAGTGGCTATCAACTCTGACTTATATAAAAACACTTCAAATTAGAGATTATCTAGAGCTGCTCTCACTCCCTAATAACATGCATTACCTCACAAATCTTGAGTACTTAGAAATTAATGGTTGTTATGAATTGTACAGAAGATACCAAAGGATGGTTGGACAAGATTGGAATAAAATATCACACATAAAAAATGTATTCATTGAGAAAGAG 1406 0.3578 MVVVKGKVSDEHRIRILYKHCHPTVIHRDMNSSNILLEPNFNAKLPVCWQPRTYWWWIQLSDFGLAITDGSQSKKNIKLSGTMGYVALEYLLDGKLSDKSDVYAFGVVLLELILGRKPVEKLAPAHGMCTKSSNFYLLRGLSEEDSLSLFVKLAFKEGEEKKYPQLLEIARKIVKKCGGIRWRCKYLRFLELSNSEYESLPRWIGKLKHLRFLDSEKLKRLPDSVCKLQNLQTLDLMGCTSLQELPEGIRTLINLHQLFLTTKQLDLPKKDIANLTSLELLFLSVCDTLESLSEKMQLSRLKTSGFKKCGTLKSLSFNLIKNVEYFMINDCLNLDSSMDHSNQIPNSSLSHHSLVGLSQLVTLPQWLQGCTNTLHVFYIGYCKNLKEFPEWLSTLTYIKTLQIRDYLELLSLPNNMHYLTNLEYLEINGCYELYRRYQRMVGQDWNKISHIKNVFIEKE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03412 459 Gene3D Ribonuclease Inhibitor 332 441 IPR032675 -
Pste4g03412 459 SUPERFAMILY L domain-like 181 432 - -
Pste4g03412 459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 120 - -
Pste4g03412 459 Pfam Protein kinase domain 19 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03412 459 SUPERFAMILY Protein kinase-like (PK-like) 21 126 IPR011009 -
Pste4g03412 459 Gene3D Ribonuclease Inhibitor 173 328 IPR032675 -
Pste4g03412 459 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03412 459 Gene3D Transferase(Phosphotransferase) domain 1 15 172 - -
Pste4g03412 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 194 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03412 Pste-Chr4 26338281 26340715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03412 17 124 Trihelix Transcription Factor Family AT1G70460 47.706 2.18e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pste4g03412 Pkinase 1.8e-14 CL0016