Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03408 CTTTCCCTCACTTTTTCTCCCTAGTGTTCTTCCTTTTTGTTCCTTCCATAATTTATTTTTCTTGGAAAAAAATTCTCACCCTTAGAAGAAGCTTCTACTGTTCATGAATTCTCTCAGATTTCCATTTTTCATCTTAGAAAAACCCTACTGAAAGATTTCCCTGATATTCCAACCCCCATATTTTCTGGGTTTTTCATTGATCGACCACAAAAAACACTTTTTTTTAAATATAAAAAAAAAAAACAGTTCCTTCTATCTCTCTAGAGTACATAGCTAATACCCCACTTTTTCTTTTCTTTTGTAATTTTCTTAATTTTCTATATTTTTCACAAGCCTCTGAATTTGACAGCCTCTGATCTCAAGTTTTGAACTTTGGTGTAATCTCTTTGTTCTTCCTCTCCTCATCCTTTTTCTCATTCTTTTTTCTTTCTTGTTTTTACACCTTCCAAACACTCCCCTCTCTCTCTTTCTCACACACATAACATAACTCAAGGTACTGAATTTCCCATCCCCCGATCTCAAGTTTCAAACTTTGCTAAAATCTTTGCTTCTTCTTCCTTTCCTCATTCTTTTTCCCCCCTTTTCTCTTCTTCAAATCCTCCAAAACTCAAACACAAACTACACAACCCACTTTTCCCCCCTTCAAATTTCCACAATTTTCCATATCTAGCCTTTAAAAAAACCCTCTAAATCCATCCAAAATCATCCCTTCTTCCTCTCCTCATTGTTTTCTTCTTCAAATCCTCCTCTCACACAATTTTCATTTTTTCCTTTTAAAATTTTCCATATCTAAACCCTCTAAATCCATCACTCCCTAATCTCAATTTTCACTTTCCTTACACCCTTTCCCAAATTTTGAAGTTCTAGTTAAATCATACTATACTTTGTGACATAAGTCTTTAAGTACAGTGACTTTACTGATTTCATCAGTAATACTGGTGACCATCATCTGAAGGACAGTAAATTGGGCATCAATTTTAATGGGAATCTGCCATGGTAAGCCCATTGAAACCCAACAAAGTGAAACCCAAGCCCAAGATTTCTCATCTTCAATTCCCAAACCCACAACCCCAAAAGCCTCAAAATTTCCCTTCTACAGCCCAAGCCCATTACCCAGATGGTTCAAAAACTCACCCTCAAACTCAACTCCAAGCAGTGTAACATCCACACCCTTGAGGCTCTTCAAGCGCCCCTTTCCCCCTCCCTCACCGGCCAAGCACATTAGGGCGCTTCTGGCTCGGCGACACGGTTCGGTTAAACCGAACGAAGCGTCCATTCCCGAAGCAAACGAGTGTGAGGTTGGTTTGGATAAGAGCTTCGGCTTCGCGAAACAGTTCACAGTTCACTATGAGCTCGGTGAAGAAGTTGGCCGAGGGCATTTTGGGTACACTTGTTCTGCCAAAGCTAAGAAGGGACCCTTCAAGGGCATTGATGTTGCTGTCAAAGTCATTCCCAAACCCAAGATGACAACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATATTGAGAGCTCTAACAGGACATAAAAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGGGAATTGCTAGATAGGATTATTTCCAGGGGTGGAAAGTATTCAGAAGAGGATGCGAGAGTAGTTATGATTCAAATATTAAGTGTAGTAGCCTTTTGTCATCTGCAGGGTGTTGTTCACCGAGATCTCAAGCCAGAGAATTTTCTTTTCACTTCTAAGGATGAAAATTCCACATTGAAGGCCATTGATTTTGGATTGTCTGACTATGTAAAACCAGATGAAAGGTTGAATGATATTGTGGGTAGTGCTTACTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGTCGTCCCTTTTGGGCTCGGACAGAATCTGGTATATTTCGGGCTGTACTGAAGGCAGATCCTAGTTTCGACGAGGATCCTTGGCCTTCTTTATCTTCTGATGCAAAGGACTTTGTAAAGAGGTTGTTGAATAAGGATTATCGTAAAAGATTGACTGCAGCTCAGGCACTAAGCCATCCATGGCTGGTGAATCATCATGATGATATGAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGTTCATCTTCTTTACGCAAATCTGCTTTACGGGTTCTTGCAAAGACATTAACAGTAGCTCAGCTGGCTTATCTCAGAGATCAATTTACTCTGTTAGGGCCAAACAAAAGTGGATTAATCTCAATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTGAATATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAATTTTGCGCTGCTGCCATAAGTGTGCACCAACTTGAGGGAATGGAGAGCTGGGAGCAATATGCAAGGCGTGCCTATGAGCTTTTTGAAAAGGAAGGAAATAGACCAATTATGATTGAGGAGCTTGCTTCGGAACTTGGGCTTGGTCCATCGGTACCTGTCCATGTAGTACTTCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGGCTTCTGCATGGGGTTTCTTCTCGCCACAAGGGTTGGTACGTTTTATATACAAGAGCATTATGGAGTTTTGAATCTATAACTTCCAAACTATGCAAATACAAAACCCGTTTCCTCAGATATAGGTGGCATCTGGTTAATAATGATCTATGCACAATATCTTTAGATGGTACCAGACTTTCAATGATATCAGTG 2864 0.398 MGICHGKPIETQQSETQAQDFSSSIPKPTTPKASKFPFYSPSPLPRWFKNSPSNSTPSSVTSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEANECEVGLDKSFGFAKQFTVHYELGEEVGRGHFGYTCSAKAKKGPFKGIDVAVKVIPKPKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRIISRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEDPWPSLSSDAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDMRIPLDMIIHKLVKAYICSSSLRKSALRVLAKTLTVAQLAYLRDQFTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQYARRAYELFEKEGNRPIMIEELASELGLGPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRHKGWYVLYTRALWSFESITSKLCKYKTRFLRYRWHLVNNDLCTISLDGTRLSMISV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03408 628 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Pste4g03408 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pste4g03408 628 Gene3D Transferase(Phosphotransferase) domain 1 213 406 - -
Pste4g03408 628 MobiDBLite consensus disorder prediction 9 30 - -
Pste4g03408 628 FunFam CDPK-related kinase 3 115 287 - -
Pste4g03408 628 FunFam CDPK-related kinase 1 116 211 - -
Pste4g03408 628 MobiDBLite consensus disorder prediction 49 74 - -
Pste4g03408 628 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03408 628 CDD STKc_CAMK 122 384 - -
Pste4g03408 628 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03408 628 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Pste4g03408 628 SUPERFAMILY Protein kinase-like (PK-like) 122 412 IPR011009 -
Pste4g03408 628 MobiDBLite consensus disorder prediction 1 37 - -
Pste4g03408 628 MobiDBLite consensus disorder prediction 49 65 - -
Pste4g03408 628 Gene3D - 407 495 - -
Pste4g03408 628 SUPERFAMILY EF-hand 414 568 IPR011992 -
Pste4g03408 628 FunFam CDPK-related kinase 1 397 569 - -
Pste4g03408 628 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 554 - -
Pste4g03408 628 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03408 628 Gene3D - 411 565 - -
Pste4g03408 628 FunFam Calcium-dependent protein kinase SK5 295 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03408 Pste-Chr4 26124854 26135642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03408 1 572 EF-hand Containing Proteins AT3G50530 66.984 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste4g03408 Pkinase 6e-70 CL0016