Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03407 GCAAAGAGTTGTTTTGTTTTTCTCCAAAATGGGTTCCAATGGTTTCAACGTGCTTCTGCGCTTCCACCTCGTGGCTTCCATCTTCTTATTCTTCTTCTGCGGGATGCAGTGCCAGCAAATAAGCGATTTTGACAACCCTTTGGTTCTGCCACGTGTCACCCAGCTCGTGGATGCTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGGCTTTGTGTCTTCTTGCATTCTGAAGACTAAAGGAGATATTATACAACGCTTGTGTACAGCTGCAGAGATAAAGTTCTACTTAAGTAGCTTATTGGAGAGGTCAAAGAGTGCCAACTATTTAAAGCCTAACAAGAACTGCAATTTAAGCTCATGGGTGTCTGGTTGTGAGCCCGGATGGGCCTGTAGTGTTCCCACAAGTCAACAACTGGACTTCAGAAATTCAAAGGAGATACCTGCCAGAACTACAAACTGTCAATCATGTTGTGAGGGGTTCTTCTGTCCTCATGGCATCACATGCATGATACGCATTACTGCAGGATGGGTTCGATATCTGAGCAAAGCTGCTTTGAGTACTTTGCTACTCATTATCTACAGCTTCTCTGACCAAGTTCTCAGTATTAGAGAAAGAAGAATGGCCAAGTCCAGAGAGGCAGCAGCCAGAAGTGTAAGAAAGACTACAAATGCACGCCAAAGATGGAAAGATGCAAAAGATGCTGCTAAGAAGGGTGCAAGTGAACTGCAAGCTCAACTATCACAAACATTTTCTCGGAAAAAGAACTTCATAGACCCTGAAGAAATCAGAATTTTGAATCAACCACCTACTGAAACAGATATTGAATTATTTTCACATTCGCATCCTATTTCCTCAACCACTGTTGGTAGTTCATGTGGCCCAAAGGAAACTGGGCAAAAACTCAGTGATCTGATCCAGATACATGAAGCAGGAAATGATCCAAATATTCGGAACAACAACAACGTTGGAGTAGAAATAGATACTAGAGATAAAAATGTTACAGCAAGAGTGTCTAAGGAAAAGGAACTGCATACACATAGCCAAATTTTTAAGTATGCATATGCTCAGCTTGAGAAAGAGAAGGCTGAGCAACAAGAAAACAAGAACCTTACCTTTTCAGGAGTAATTAATATGGCTACCAGAAGTGAACAAAGGAAAAGGCCTTTAATTGAAATATCTTTCAAGGATCTAACTCTCACTTTGAAAGCACACAATGTACATATATTGAGATCTGTTACTGGGAAAATTAAACCTGGCCGCATTACTGCTGTTATGGGCCCATCAGGTGCAGGCAAGACAACTTTTCTTTCAGCAATAGCTGGGAAGGCTTTTGGATGCAAGGTTAGTGGTTCCATTTTTATAAATGGAAAAAAGGAATCAATCCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACTGTGGAAGAAAACTTCCGGTTCAGTGCACTGTGCAGGCTACCTGCTGACTTGCCAAAACCAGACAAAGTTCTTATTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTAAGGAATTCTCTGGTTGGAACAGTAGAAAAGCGAGGAGTCTCTGGAGGGCAAAGGAAGCGTGTTAATGTTGGATTGGAAATGGTAATGGAACCTTCACTCATGATCTTGGATGAACCCACTTCTGGGTTAGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGACCAAAAGGTGGTCTTACTGTATATCATGGATCGGTGATGAAAGTTGAAGAATACTTTGCAGACCTGGGGATAAATATTCCAAAGCGCATTAACCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGCAGTACCTAGTGGAAGTTCAGGAGTGAGTTATAAAGAATTGCCACTTAGATGGATGCTTCATAATGGATACCCTGTGCCTCTTGATATGCAGCAGAATGCAGCACAATTTGGTATGTTTGTAACTGCAAACCCTGATAAAGAAACAGATCCTCATGGCTCTGGTCATGAAGAAAGAAGCTTTGCTGGAGAATTATGGCATGATGTGAGAAATGGTATGGAACTAAAAAGTGAGAAATTAAGGCTCAACTTCTTAAAATCAAGGGATTTATCTGACCGTAAAACTCCTGCCTGCTTAGGATCAATTACTAAAGCTAATGATCAGAACTTTGGTGCAGCTGGATACACCTATACGGTGATTGCAGTATCTCTTTTATGCAAAATATCTGCCTTGAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCGTATTTTCTCTCTAAAGACACTATTGATCATTTCAATACAGTCATCAAACCTGTGTGGTCAGTACTTCTTCCAGTTGTTTTGACACTCGTTGCAACACAAACAAAAGATAGTAAAATTTTGAAGGATATATCTTATTTATGCTACTCTAGATGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCATGGGGTATGGCTCCTAACTCGTTGTGGTTCACTACTGAAAAGTGGCTATAATCTTCATGATTGGGGTTTGTGCATATCTATCCTCATTCTCATGGGTGTAATTGCTCGGGTTGTAGCATTTTTTTGCATTCTCATAGAAGTGAAAGAAAATGGAGTTGTGAGTTTGGTTTATTGTAAAACTGAAGAT 2704 0.4027 MGSNGFNVLLRFHLVASIFLFFFCGMQCQQISDFDNPLVLPRVTQLVDADWNKAFNFSSDLGFVSSCILKTKGDIIQRLCTAAEIKFYLSSLLERSKSANYLKPNKNCNLSSWVSGCEPGWACSVPTSQQLDFRNSKEIPARTTNCQSCCEGFFCPHGITCMIRITAGWVRYLSKAALSTLLLIIYSFSDQVLSIRERRMAKSREAAARSVRKTTNARQRWKDAKDAAKKGASELQAQLSQTFSRKKNFIDPEEIRILNQPPTETDIELFSHSHPISSTTVGSSCGPKETGQKLSDLIQIHEAGNDPNIRNNNNVGVEIDTRDKNVTARVSKEKELHTHSQIFKYAYAQLEKEKAEQQENKNLTFSGVINMATRSEQRKRPLIEISFKDLTLTLKAHNVHILRSVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKVSGSIFINGKKESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPDKVLIVERVIEFLGLQSVRNSLVGTVEKRGVSGGQRKRVNVGLEMVMEPSLMILDEPTSGLDSASSQLLLRALRPKGGLTVYHGSVMKVEEYFADLGINIPKRINPPDYFIDILEGIAVPSGSSGVSYKELPLRWMLHNGYPVPLDMQQNAAQFGMFVTANPDKETDPHGSGHEERSFAGELWHDVRNGMELKSEKLRLNFLKSRDLSDRKTPACLGSITKANDQNFGAAGYTYTVIAVSLLCKISALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVWSVLLPVVLTLVATQTKDSKILKDISYLCYSRWALEAFIIANAERYHGVWLLTRCGSLLKSGYNLHDWGLCISILILMGVIARVVAFFCILIEVKENGVVSLVYCKTED 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03407 892 Pfam ABC transporter 402 554 IPR003439 GO:0005524
Pste4g03407 892 SMART AAA_5 411 683 IPR003593 GO:0016887
Pste4g03407 892 FunFam ABC transporter G family member 24 379 572 - -
Pste4g03407 892 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Pste4g03407 892 Gene3D - 370 578 IPR027417 -
Pste4g03407 892 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 573 823 - -
Pste4g03407 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 571 IPR027417 -
Pste4g03407 892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 635 IPR003439 GO:0005524
Pste4g03407 892 Pfam ABC-2 type transporter 570 709 IPR043926 GO:0140359
Pste4g03407 892 Pfam ABC-2 type transporter 783 876 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03407 Pste-Chr4 26099381 26120681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03407 378 568 Calmodulin-binding Proteins AT2G36910 29.592 5.18e-15 77.8