Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03368 CTCAGTCGTTAGTTTTTTCACAGAAGAACATTGCATTACATAGACCCAGAAGAAGATAGTTAAGTAGATACAAAATCTACTTTCTACTGAAACTTCTGGTTCGTTTTCGGGGTCCAAAATTTTCGTTAATTAATACCATATATATTTTTTATAAGCTTTATTGTTTTTATTTTTAGTTTTTAATCTATTTTTCGTTCGACAAAAGAAACAGGGCAAGGTTGTGTTTCTCTTTTGATGAGGTTTTTTACTTTAACGCCAGAATCTGAAACAACAACAAGAACAACACCAAACGTATGTTGATGATTGTAATTGTGAGAATATTAATAATAATAATAATTATCATAATACGTGTGAGTTTGTTTCTGATTTTGTGGTGTTACCGTAAACCTCATCCCCCTTTCAATCCAACGTTTATCTATTGCCTATATCTGAATCAAAACTCAACCTTTGCCAAAACGCAACGCCAAAATTTTGTTTTTTGAGCAAAGTATCTTTAAGCTCTGGTTATTGATCATCGACAACCAAAATTTCCATTTTGGTTACAAGGGCTAGGACTACATTGATCAGAGGCAATTGGCATTAGAAAAATTCCATTTTTATTGTTGGGTTGTTGGTGGATTTGATTTTGCCCTCGATCTATAGATCAGGGGTTGTGGCTTTTGGTTTTGATGATGAGAATGAATAAAGGGTCAATTGATTATTGGAGGAATTACTTTGGAGCTGCGAACTCTGACATATTTGGCATCATTGACCATGCGATCATGGTGGCTGCTTCTGATTGCCCCAAGGAGTTCAGGTTGAGGAGGGGTGCCATTGCAGAGAGGTTGTTTTCTTGCAGATTGAGTCGGTGTTTGGGGTGTGAGAGGGTGGAATTGGCTGTGTCAGTGGATGATGATGATGATGGTGGTGGTGAACCTTGCAAGAGCTGTTTTGAGTTTAAAGCGGGTGCAAGTAAAGAGAGCAAGGTCAATAGTGTCAGAGATGATCCTGTCATGAACATGAATCAAGTTAGCAATTTCAGCTATGGGGATGCAGAGGCATTGACTGATGAGATTGAAGAAGAGTCTCAATATGTTGAGGAGGTTTTCAGGATCAAGGATCTTTTGCTTAACTGTGAAGAAGAGTCCGATTCAGTGTTGTTTGATTCATTGAGGAGACTTCAGCTGATGGAACTCACAGTGGATCTTCTTAAGGCTACTGAGATAGGAAAGGCTGTCTATCCTCTTCGAAAGCATGGGTCAAGTGATGTTTGTCACCTTGCACGGACGCTTATTGATGTCTGGAAAGAAATGGTGGATGAGTGGGTCAAGGCTACCACAGCTATTACAGGTTCAGAAGGTACTCCAGATTCGGTAAATCCATCTGTTGTAGATGATGAAGAGGGACTTCCATCACCTCCTATGGATGAAGGGGCTTTATTTGCTGCTCCAACCAGTTCAATGGAACTCTCACAGTTAGAAACTAACTTCGACTTCTCATCATTGGATGTCACATATTTTGATGATGCGAAGTTCTTTGATGGCATGGATGACAATGGAAATCCTCAACACAGTGGGGAATTCATCAAGAACCATGAAAATGAAAGACCATCTCTGAACAGTCAAAATACAGTAAAGAGAAAACCTCAGCCATCGAATGAGGCAAACATCATTGCCAAGGACGGTAAACCTCAGCAAGCAAAAAATAATGAGGCTGCTGTGAGGCCAAATAAACCAGTAATCGCTGATTCTGGCCCTGGCAGACCACCAAAATCAACTATGCAGAAGAAAAAATGCAATATTGAGCCAAAGATGCAACAAAATAGAGTGAAGAGTGCTATCCCAAAAGATCCTCAAGTTCTTCAGCAAGATAAACTCAAGCGTTCAGATTCTGCTGCTGTCCACGTGAAGTTAGAAGCCACTAAGAGGAAACTTCAGGAGCGGCTGAGGCTCAGTAAGCGAGGAAACCACGTCAGTCAAAGGTACCCAATTGGGGGGGTCCATCTTCTTTCAAGAAGAGTTCAACCCAAAAGTTCAACAATTGATTTTCATCCCCAACCATTGGTGCTATAG 2051 0.4027 MMRMNKGSIDYWRNYFGAANSDIFGIIDHAIMVAASDCPKEFRLRRGAIAERLFSCRLSRCLGCERVELAVSVDDDDDGGGEPCKSCFEFKAGASKESKVNSVRDDPVMNMNQVSNFSYGDAEALTDEIEEESQYVEEVFRIKDLLLNCEEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVYPLRKHGSSDVCHLARTLIDVWKEMVDEWVKATTAITGSEGTPDSVNPSVVDDEEGLPSPPMDEGALFAAPTSSMELSQLETNFDFSSLDVTYFDDAKFFDGMDDNGNPQHSGEFIKNHENERPSLNSQNTVKRKPQPSNEANIIAKDGKPQQAKNNEAAVRPNKPVIADSGPGRPPKSTMQKKKCNIEPKMQQNRVKSAIPKDPQVLQQDKLKRSDSAAVHVKLEATKRKLQERLRLSKRGNHVSQRYPIGGVHLLSRRVQPKSSTIDFHPQPLVL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03368 460 MobiDBLite consensus disorder prediction 219 248 - -
Pste4g03368 460 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 134 223 IPR035441 -
Pste4g03368 460 ProSiteProfiles TFIIS N-terminal domain profile. 137 212 IPR017923 -
Pste4g03368 460 MobiDBLite consensus disorder prediction 287 368 - -
Pste4g03368 460 MobiDBLite consensus disorder prediction 305 321 - -
Pste4g03368 460 Pfam TFIIS helical bundle-like domain 161 209 IPR017923 -
Pste4g03368 460 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 418 IPR044805 -
Pste4g03368 460 SMART TFS2_5 139 211 IPR003617 GO:0005634
Pste4g03368 460 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 127 221 IPR035441 -
Pste4g03368 460 CDD TFIIS_I 137 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03368 Pste-Chr4 25674828 25682472 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pste4g03368 Med26 3.3e-08 No_clan