Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03357 ATGGGTGTGGACATGAACCTAAAGTTCCATTGCTTATGTCTTGTAATTTTACTAGCTTCAAAAGCAGCATCTCAACCCACTTCAGATAATTGCCCCCAAAACTGTGGCAATCTCAACATCCCTTACCCTTTTGGGACACGCGAGGGTTGCTACTTGAACCACAGTTTCCTCATCACTTGCAACCATAATAATTTCACCACACCCATCCCTTTATTGAGAGGAGACAAAAACATAGTGGTGCTCAACATATCAGTAGATGATGGGGAAATTCTAGTTTCAAGTCCCGTAATCAGAGATTGCTATGGTACCAAAGGAAATCAACTTACTTCTATTGATGAAAACAGTTTCAATTTGACCCACTTTTCAATCTCGCCAAGTAAGAACAAATTCACCGCTCTTGGGTGCGACACGGTTGGAGTATTCATGGGTTATGATAGCAACAAAAAACATGTTACAACAACGGGGTGTGTATCCACTTGTAGCACACTTGATGAAATCACAAGTAATGGGTCGTGTAATGGCATTGGTTGTTGCCAAATTGGGGTTCCCAGTGGAACATATGGTTTTGCAATGCAAACTTGGAGTAGGAACAACCACTCCACTGTATGTGACTTCAATCCTTGTAACTATGCGTTCACCGTTGCGGAAGGGTATTACTACTTCAAAACAGTAAATCTTCAGAACCTCGAAAATGAGAGCTTGCCCATAGTGCTGGATTGGGCCGTGGGAAATCAAACGTGCACAGAGGCCCAAGCCCAACAAGATCTTAGTGGCTATGCATGCAAGGCTGAGAACAGTGATTGCCTTAATTCGACACATGGGATTGGTTATCGTTGCAAATGCAGTTCTGGTTTCCTGGGAAATCCTTACGTCCATAATGGATGCCAAGATATGAATGAATGCGCCATGAAGCCGGGTCCGTGCGTGGTGATGAGCAAAAGATGCGAAAACCTTCCGGGCAGTTATAAGTGCTTATGCCCGAAGAGGCACGAAGGAGATGGAAGAATCGATGGCCTAGGTTGTCGACCCAAAAAACACAAATACATAGGGAATCTCGTACTTATTATTGGATTGAGTTTGAGCTTAAGTCTTTTGGCAGTGGTCGTTGGATGCCTAAACATATACCCCCAAATCCGTGAAAGGAAACTCGTGAAAATGAGAGAAAACTATTTTCAAAAAAATGGAGGCATACTGATGCAGGAACGAATTGATTCACTCCAAGGCTCAACTACTGAAAGAGCCACAATCTTCACGGTTGAGGAGCTTAAGAAAGCCACCAACAACTATGACGAGGATAGAATCGTAGGCAAAGGAGGTCATGGAACAGTGTACAAAGGTATATTATCAAATGGTAGAGTTGTTGCCATCAAGAAGTCTATGGTTTCCAGCCAAAGTGAGATTGAGCAATTCATCAATGAAGTGGTTGTGCTTTCTCAAATCAACCATAGAAATGTTGTCAGATTACTAGGTTGTTGTTTAGAGACAGAATTTCCCTTACTTGTTTATGAGTTCATCACTAATGGGACCCTCTGTGAGCATCTACATTTTGAAGGTGAAGCATACAATAATAATAACAAACTTTCATGGACAACACGTTTAAGAATTGCAGCAGAGACAGCAGAAGCTCTTGCATACTTGCATTCTGCTGTTTCCACTCCAATCATACATAGAGATGTTAAAACTGCAAATATTCTCCTAGATTACAACCTCACAGCCAAGGTTTCTGACTTTGGAGCTTCGAAGCTTGTTCCTCTTGATCAAACTCAGTTAACCACTCTGGTACAAGGAACGATGGGTTACCTTGACCCTGAGTACTTCCAAACAAGTCAACTAACTGAGAAGAGTGACGTTTATAGTTTTGGTGTTGTCCTTGCAGAACTATTGACAAGTAAGAAGGCACTTTCATTTTTTAGGCCTGAGATTCATAGAAACTTGTCCATGTATTTTGTTTCTTCAATGAATGAGGGTAGTTTGGATCAAATATTGGACACTGAAATTGTAAGTGATGCAAGTATCGAGTATATAATAGAAGTTGCTAATCTAGCCAAAAGGTGTCTTAGGCTAAAAGGAGAAGAAAGGCCAAGCATGAAAGAAGTGGCAATGGAGTTAGAAGGAATGAGGGTCATGGAGAAATATTCATTTAGAGGAGCAAATGATGTTGCCTCCCAAGAAGAGACAGAGTGCTTTCTCAAAGCACGTTCCCACATAAACATAGTTGATCATGGAGATGGTACTAGTGGCAGCAGTACACTTTCTAGGTTCTATGATCTACACAACCAGATTTTGGAACCATTAGGGAATGGACGCTAA 2310 0.4152 MGVDMNLKFHCLCLVILLASKAASQPTSDNCPQNCGNLNIPYPFGTREGCYLNHSFLITCNHNNFTTPIPLLRGDKNIVVLNISVDDGEILVSSPVIRDCYGTKGNQLTSIDENSFNLTHFSISPSKNKFTALGCDTVGVFMGYDSNKKHVTTTGCVSTCSTLDEITSNGSCNGIGCCQIGVPSGTYGFAMQTWSRNNHSTVCDFNPCNYAFTVAEGYYYFKTVNLQNLENESLPIVLDWAVGNQTCTEAQAQQDLSGYACKAENSDCLNSTHGIGYRCKCSSGFLGNPYVHNGCQDMNECAMKPGPCVVMSKRCENLPGSYKCLCPKRHEGDGRIDGLGCRPKKHKYIGNLVLIIGLSLSLSLLAVVVGCLNIYPQIRERKLVKMRENYFQKNGGILMQERIDSLQGSTTERATIFTVEELKKATNNYDEDRIVGKGGHGTVYKGILSNGRVVAIKKSMVSSQSEIEQFINEVVVLSQINHRNVVRLLGCCLETEFPLLVYEFITNGTLCEHLHFEGEAYNNNNKLSWTTRLRIAAETAEALAYLHSAVSTPIIHRDVKTANILLDYNLTAKVSDFGASKLVPLDQTQLTTLVQGTMGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTSKKALSFFRPEIHRNLSMYFVSSMNEGSLDQILDTEIVSDASIEYIIEVANLAKRCLRLKGEERPSMKEVAMELEGMRVMEKYSFRGANDVASQEETECFLKARSHINIVDHGDGTSGSSTLSRFYDLHNQILEPLGNGR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03357 769 Gene3D Phosphorylase Kinase; domain 1 396 504 - -
Pste4g03357 769 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Pste4g03357 769 SUPERFAMILY EGF/Laminin 295 345 - -
Pste4g03357 769 SMART egfca_6 297 342 IPR001881 GO:0005509
Pste4g03357 769 CDD EGF_CA 297 333 - -
Pste4g03357 769 ProSitePatterns Calcium-binding EGF-like domain signature. 297 324 IPR018097 GO:0005509
Pste4g03357 769 ProSiteProfiles Protein kinase domain profile. 429 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03357 769 SMART serkin_6 429 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03357 769 Gene3D Laminin 244 337 - -
Pste4g03357 769 Pfam Protein kinase domain 429 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03357 769 FunFam Wall-associated receptor kinase 2 398 504 - -
Pste4g03357 769 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Pste4g03357 769 Gene3D Transferase(Phosphotransferase) domain 1 505 727 - -
Pste4g03357 769 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Pste4g03357 769 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 315 326 IPR000152 -
Pste4g03357 769 CDD STKc_IRAK 435 706 - -
Pste4g03357 769 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Pste4g03357 769 Pfam Calcium-binding EGF domain 297 331 IPR001881 GO:0005509
Pste4g03357 769 FunFam Fibrillin 2 292 337 - -
Pste4g03357 769 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 717 IPR045274 GO:0007166
Pste4g03357 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Pste4g03357 769 FunFam Wall-associated receptor kinase 2 505 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03357 Pste-Chr4 25579027 25583672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03357 7 708 Receptor kinase-like Gene Family AT1G21230 45.594 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g03357 Pkinase 1.7e-46 CL0016