Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03356 ATGAGAGAAGAAGAGGCAAATTGGTTCTCAAGGTGGGAAGAGGATCTTCCTTCCCCTGAGGAGCTCATGCCTTTGTCCCAAACCCTAATAAGCCATGACCTTGCAATGGCCTTTGACATAACAAACCTAGAAGAGGAACCTGCGCGCACGCTGAAGAGGCCGCGTTTGGTGTGGACCCCACAGCTGCATAAGCGCTTTGTGGACGCTGTGGCCCACTTGGGAATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGGTTGACCCGCGAAAACGTCGCCAGCCACCTGCAGAAGTACCGCCTCTACTTGAAGCGCATGCAGGGGCTGTCCGCCGGTGGTGGTGGCGCCGGCGCCGGCTCCGCCGACCCCGCCACTGACCGCCTCTTCGCCAGCTCCCCGGTGCCGGCGCACTTCCTGCACCCAGCCATTGCACGGCCGAGTGCAGAACATTACTTGTCTTATGTGCCGGTGCCGTCCCAGCACCAGCACTTGGCGGTGGCTGCTAGCCACCGCCATTATGGCTCGCCGCGAGACGGACACTTTGAGCTTCCCATCCTGTCCAGGATGGGCGCTCCTGTGCCAGGTTTCGCAGCGAGGGAGGATGTGGAATCTGGAGGGAGGAGGGTTCTTACTTTGTTTCCAGCTGGAGATATCGGCTGCAATTCTTGTGTGTTATCAATTGAGGAGTTCTATATAAGCATTGGCAGGAACAAGTTTGCTATTTATGAGCCTGAAGATAGTGTCAAGTGTGCTGTGGTTGTTAGATATCAGAGGAAGCATATCAGTCTGTAG 807 0.5638 MREEEANWFSRWEEDLPSPEELMPLSQTLISHDLAMAFDITNLEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGAGAGSADPATDRLFASSPVPAHFLHPAIARPSAEHYLSYVPVPSQHQHLAVAASHRHYGSPRDGHFELPILSRMGAPVPGFAAREDVESGGRRVLTLFPAGDIGCNSCVLSIEEFYISIGRNKFAIYEPEDSVKCAVVVRYQRKHISL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03356 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 109 IPR017930 -
Pste4g03356 268 NCBIfam myb-like DNA-binding domain, SHAQKYF class 54 106 IPR006447 GO:0003677
Pste4g03356 268 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 179 IPR044841 GO:0003700|GO:0006355
Pste4g03356 268 SUPERFAMILY Homeodomain-like 50 110 IPR009057 -
Pste4g03356 268 Gene3D - 50 112 - -
Pste4g03356 268 FunFam Two-component response regulator 49 112 - -
Pste4g03356 268 Pfam Myb-like DNA-binding domain 57 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03356 Pste-Chr4 25555675 25557919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03356 1 222 G2-like Transcription Factor Family AT5G05090 50.916 1.69e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g03356 Myb_DNA-binding 1.8e-08 CL0123