Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03353 AGATGGCCACAGCAGAAGAAACTTCAACTTTGAAACTGTTGCGCCAATATCTCTTGGGGGATGTTTCAGACCCTTTTCTCACCAATCTTGTTCCTGTAAAACTTGAGAACCCCTCATCAGAACTTGATTCGGGTGCAAACTTCTCAGAGCAAAGCAGCTTCTTCGGGTTTCTAGAATGCTTTGATTTTGAAGCAGACAGAGAAGTGGTAGATCTCACTTCTCATGAAGTCCAAAACTCCATTGCAACAAGTCCACCTCAGAATTTGGATTTGGCAGAACCAATGGTGTCAGTGAAAAAGGAAGCAACGTGTAGTTATGAGGCAAGGCGTTACAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTTTGCTGCAGAGATTCGTGACCCCAAAAAGAAAGGGAGCAGGGTGTGGCTTGGAACTTTTGACACTGAGATTGATGCTGCTAAGGCTTATGACTGTGCTGCCTTCAGAATGAGGGGTCAGAAAGCCGTATTGAATTTCCCTTTAGAGGCTGGAAAATCTCATCCCGACCCCAATAGTTGTGCCAGGAAAAGGAGAAGAGAGTTCACAACACCTGCCACAACTTCAAGTCATAATAGAGAAGATAACCAATCAAAAACAAAAAAGAAGACACAAGAGAAACATGAATCAGAACGATCAGCGTTGGTGAACAAGACT 677 0.4446 MATAEETSTLKLLRQYLLGDVSDPFLTNLVPVKLENPSSELDSGANFSEQSSFFGFLECFDFEADREVVDLTSHEVQNSIATSPPQNLDLAEPMVSVKKEATCSYEARRYRGVRRRPWGKFAAEIRDPKKKGSRVWLGTFDTEIDAAKAYDCAAFRMRGQKAVLNFPLEAGKSHPDPNSCARKRRREFTTPATTSSHNREDNQSKTKKKTQEKHESERSALVNKT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03353 225 MobiDBLite consensus disorder prediction 168 225 - -
Pste4g03353 225 FunFam Ethylene-responsive transcription factor 2 108 169 - -
Pste4g03353 225 Gene3D AP2/ERF domain 108 169 IPR036955 GO:0003700|GO:0006355
Pste4g03353 225 PRINTS Ethylene responsive element binding protein signature 149 169 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 MobiDBLite consensus disorder prediction 200 225 - -
Pste4g03353 225 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 MobiDBLite consensus disorder prediction 176 190 - -
Pste4g03353 225 Pfam AP2 domain 109 159 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 SUPERFAMILY DNA-binding domain 109 168 IPR016177 GO:0003677
Pste4g03353 225 CDD AP2 117 167 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
Pste4g03353 225 PANTHER DNA-BINDING DOMAIN 79 212 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03353 Pste-Chr4 25421948 25423429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03353 1 186 AP2-EREBP Transcription Factor Family AT5G07580 44.118 7.10e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g03353 AP2 2.5e-14 CL0081