Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03337 ATGGAGGCTGACTGTACAGGGGACAGGAGCTTGTTCTGTACAATCTCCAGTCTCAAAGGGCCTACTGTTAATCGTAGTGACAGAATGGATCTGCAGAGAACTGAAGCTATGGATGCAAATGATGCAAATTATTCTGGTGGAAACAGCCATCTGAATCCTTTAGTTCCAGGTGAAGAAGAGGAATATGAGTCTTTCAATGAAGCAGACCAATCAGTAATGAATTATCCAAGTCTTGAAGTTGATCTTGAAGAGGAGGATCTTGATATTCCTTGGAGGGAACTTATTTTAAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTACGTGCAGACTGGCGTGGTTCTGATGTTGCTGTCAAGATTCTTAAAGTGCAAGGTTTTGATCCTGAACGATTTGAAGAGTTTTTAACGGAGGTCTCACTCATGAAACGTCTACGGCATCCAAATATTGTACTTTTGATGGGTGCCGTTATTCAACCTCCAAAGTTATCAATAGTTACAGAATATTTATCAAGAGGTAGTTTGTATGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGTGAGAGGCGTCGTTTAAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCGAATGAAACCTCCAATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCGTACACTGTTAAGGTATGTGACTTTGGCCTTTCACGAACAAAGGCAAACACATTTCTTTCCTCTAAAACCGCAGCCGGGACTCCTGAGTGGATGGCACCTGAAGTCATCCGAGGTGAACTGTCAAACGAAAAGTGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACAATTTAATCCCTCACAGGTTGTTGCAGCTGTTGGTTTCATGGGCAAAAGGCTAGAGATTCCAAGACAAGTGAATCCTAAAGTGGCTACCTTGATTGAGCTCTGCTGGGCCACGGAACCCTGGAGACGGCCTTCTTTCTCCTATATCATGAAATGTTTGCGGCAAATAATTGCTGATGGTAAAGGGCGAGGGTGA 1080 0.4287 MEADCTGDRSLFCTISSLKGPTVNRSDRMDLQRTEAMDANDANYSGGNSHLNPLVPGEEEEYESFNEADQSVMNYPSLEVDLEEEDLDIPWRELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDPERFEEFLTEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSERRRLSMAYDVASGMNYLHRMKPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRQFNPSQVVAAVGFMGKRLEIPRQVNPKVATLIELCWATEPWRRPSFSYIMKCLRQIIADGKGRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03337 359 PRINTS Tyrosine kinase catalytic domain signature 319 341 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 PRINTS Tyrosine kinase catalytic domain signature 168 181 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 PRINTS Tyrosine kinase catalytic domain signature 275 297 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 PRINTS Tyrosine kinase catalytic domain signature 256 266 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 PRINTS Tyrosine kinase catalytic domain signature 209 227 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 FunFam Serine/threonine-protein kinase CTR1 173 357 - -
Pste4g03337 359 Pfam Protein tyrosine and serine/threonine kinase 95 348 IPR001245 GO:0004672|GO:0006468
Pste4g03337 359 SUPERFAMILY Protein kinase-like (PK-like) 73 348 IPR011009 -
Pste4g03337 359 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 350 - -
Pste4g03337 359 ProSitePatterns Protein kinases ATP-binding region signature. 100 121 IPR017441 GO:0005524
Pste4g03337 359 SMART serkin_6 94 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03337 359 ProSiteProfiles Protein kinase domain profile. 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03337 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Pste4g03337 359 Gene3D Transferase(Phosphotransferase) domain 1 173 357 - -
Pste4g03337 359 CDD STKc_MAP3K-like 100 346 - -
Pste4g03337 359 FunFam Serine/threonine-protein kinase isoform 1 84 172 - -
Pste4g03337 359 Gene3D Phosphorylase Kinase; domain 1 87 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03337 Pste-Chr4 25061723 25070199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03337 70 352 MAP Kinase Kinase Kinase AT5G03730 72.085 3.59e-141 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste4g03337 PK_Tyr_Ser-Thr 1.6e-68 CL0016