Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03331 ACATAAACCAGAAACTAAGACAAAGAGTAATAGTCAAACAACTGCAAATGGCTGTGTATTCAAAGCAATTGCTGCTTATTATTGTGCTCTTTATTCTTACAATTGTTACTACAACTCAGAATGAATCCTTAGCATCATCAAAGGCAAACTGCCCAGAAAAGTGTGGTAACATAACCATTCCCTACCCATTTGGCATGACCCTTAATTGTTCCTTCAACCCTTCCTTTCATATGACTTGCAACCATACCTTTTCACCACCCATTCTCTTCTTCAAAAAACATTTTGAGTATGGGCCAGAGTTCCAAGTGGTAAACATTTCACTCAAGGGAGAACTCACAATTTCATTGCCAGTAACCACAGATTGCTTGCTTCCAATGTCGATATATGGTGAACTCTTAGCAGTGGGGTGGATCTTCGACCTGGGACCTTTTCAACTCTCTTCAACGCAAAACAAGTTAACTGTGGTGGGTGGTAACACGGTTGGAATAATAAAATCGGAAAATTCTTTGAATCAATTTAGTACATGCGTATCTTTGTACGATAATGAGTCAATATCTAACGGCTCATGTTCTGGAATTGGTTGCTGCCAAACTTCAATACCACATGGTCTTTCCTATTTCTCTTATAATTCTTATCCTAATGTCTTCAACCATAGTCGTAACACTGCGTGGGAGGGCAGCCCCTACAACTGCAGTTATGCGTTTCTGGTTAAAGATGGAGAATACCATTTCTTCGCCACCCGTACGAAAATCCTCAACCTTAGGAACAACACCATGTTTCCTGTGGCTGTGGATTGGGCAATAAATAACCACACCTGCAAAGATATATGTATGTCAAAGAACAGTCTGTGTTACAAAGCACCAAACATGGGACATGGTTATCTTTGTAACTGCTCTGCTGGCTTCCGCGGAAATCCTTACCTTAGCGATGGTTGTCGAGGTGTAAGCGTAGGTATATTAACACTTCTTGGGGGAATCTTTTATGCATATTGGAAACTGAAGAAAAAAAATCTCATCAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCCTATTATTACAACAACAGCTAGCCAAGTGTAGTGGATCAACTGAAACAACAAAAATATTTACTTTGGAGGAACTAGAGAAGGCCACTAAAAATTTTGATGAAGGCATGGTGGTAGGCAAAGGTGGACAAGGAACAGTGTACAAAGGAATATTACATAATAATATAGTTGTAGCAATAAAAAGATCCAAAATTAGCAACTCAAACCAAATTGAGCAATTCATTAATGAGGTGATAGTTCTTTCTCGAATTAACCATAGAAATGTGGTAAGGCTCTTGGGATGTTGCTTAGAGACTGAAGTTCCCTTGCTTGTTTACGAATTCATTCCTAATGGTACTGTTTATGAGCATCTTCACAATGAAGGTCAATCTTTAAGACTTACATGGGAAACAAGATTGCAAATAGCAACAGAGACCGCTGAAGCCTTGGCATACTTACATTCAGCTGCCTCTGAACCAATCATACATAGAGATGTGAAAACTGCAAACATACTACTTGATTACAATCTCATTGCTAAGGTTTCTGATTTTGGAGCTTCAAAGATTATTCCTCTTGACCATACTCAGTTAACCACTCTAGTACGAGGGACACTAGGTTATCTAGATCCAGAATACTTTCAAACAAGCCAATTAACAGAGAAGAGTGATGTGTTTAGCTTTGGAGTTGTCGTAGTGGAATTACTAACAGGAAAAAAGGCACTCTCTTTTGATAGGCCAGAGTCTCATAGAAATCTTGCAATGCACTTTCATTCTACATTGAATGAGGGTAGCTTTCTTAACATTGTAGACAGGCACATTATAGATGAGGCAAATGTTGAGCAGCTAATGGATGTTGCTAATATTGCAGAACATTGTTTAAGGTTGAAAGGAGAGGAAAGGCCTACCATGAAAGAAGTGGCAAAGGAACTTGAAAGAATAAGTATACTGAAAAAGCATCAATGGGAAAAAGTCAATTTGTCTCCAGAGGATGCTGAAAATTTTCTGAATGAATCATCTTCTTTCAATACTACAGATGATGCCGAAGAAAGAAGTACTTATTCTAGCTTTGATATTTCAAAACAAAATTTTTGGTCCTCAAGTGGTTATCTAGATCCAGAATACTTTCAAACAAGCCAATTAACAGATAAGAGTGATGTGTTTAGCTTTGGAGTTGTTCTAGCACTCTCTTTTGAAAGGCCAGAGCCTCATAGAAATCTTGCAATGCACTTTCATTTTGCATTGAATAAGGGTAGGTTCCTTAACATTGTAGATATTCACATCATAGATGAGGCAAATGTTGAGCAACTAATGGATGTTGCTAATATTGCAGAACATTGTTTAAGGTTGAAAGGGGAGGAAAGACCTACGATGAAAGAAGTGGCAAAAGAACTTGAAAGAATAAGTATAGTGGAAAAGCATCGATGGGAAAACGTCAATTTTTCCCCAGAGGAGACTGAAAGAGTTCTAGAAGCAACACAATCACCTTCTTTCGATATTTTAGATGATGTCGAAGAAAGAAGTGTTTATTTTGGTTCTGATATTTTAAAACAAAATTCCACATCCTTAAGTGGGGGAAGA 2606 0.3784 MAVYSKQLLLIIVLFILTIVTTTQNESLASSKANCPEKCGNITIPYPFGMTLNCSFNPSFHMTCNHTFSPPILFFKKHFEYGPEFQVVNISLKGELTISLPVTTDCLLPMSIYGELLAVGWIFDLGPFQLSSTQNKLTVVGGNTVGIIKSENSLNQFSTCVSLYDNESISNGSCSGIGCCQTSIPHGLSYFSYNSYPNVFNHSRNTAWEGSPYNCSYAFLVKDGEYHFFATRTKILNLRNNTMFPVAVDWAINNHTCKDICMSKNSLCYKAPNMGHGYLCNCSAGFRGNPYLSDGCRGVSVGILTLLGGIFYAYWKLKKKNLIKLKEQFFQQNGGLLLQQQLAKCSGSTETTKIFTLEELEKATKNFDEGMVVGKGGQGTVYKGILHNNIVVAIKRSKISNSNQIEQFINEVIVLSRINHRNVVRLLGCCLETEVPLLVYEFIPNGTVYEHLHNEGQSLRLTWETRLQIATETAEALAYLHSAASEPIIHRDVKTANILLDYNLIAKVSDFGASKIIPLDHTQLTTLVRGTLGYLDPEYFQTSQLTEKSDVFSFGVVVVELLTGKKALSFDRPESHRNLAMHFHSTLNEGSFLNIVDRHIIDEANVEQLMDVANIAEHCLRLKGEERPTMKEVAKELERISILKKHQWEKVNLSPEDAENFLNESSSFNTTDDAEERSTYSSFDISKQNFWSSSGYLDPEYFQTSQLTDKSDVFSFGVVLALSFERPEPHRNLAMHFHFALNKGRFLNIVDIHIIDEANVEQLMDVANIAEHCLRLKGEERPTMKEVAKELERISIVEKHRWENVNFSPEETERVLEATQSPSFDILDDVEERSVYFGSDILKQNSTSLSGGR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03331 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Pste4g03331 853 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 646 IPR045274 GO:0007166
Pste4g03331 853 Gene3D Transferase(Phosphotransferase) domain 1 443 663 - -
Pste4g03331 853 Gene3D Transferase(Phosphotransferase) domain 1 664 811 - -
Pste4g03331 853 SUPERFAMILY Protein kinase-like (PK-like) 349 639 IPR011009 -
Pste4g03331 853 ProSiteProfiles Protein kinase domain profile. 367 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03331 853 Pfam Wall-associated receptor kinase galacturonan-binding 35 95 IPR025287 GO:0030247
Pste4g03331 853 SMART serkin_6 367 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03331 853 FunFam Wall-associated receptor kinase 2 443 660 - -
Pste4g03331 853 Pfam Protein tyrosine and serine/threonine kinase 689 791 IPR001245 GO:0004672|GO:0006468
Pste4g03331 853 Pfam Protein tyrosine and serine/threonine kinase 372 637 IPR001245 GO:0004672|GO:0006468
Pste4g03331 853 SUPERFAMILY Protein kinase-like (PK-like) 687 794 IPR011009 -
Pste4g03331 853 Gene3D Phosphorylase Kinase; domain 1 342 442 - -
Pste4g03331 853 FunFam Wall-associated receptor kinase 2 337 442 - -
Pste4g03331 853 CDD STKc_IRAK 373 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03331 Pste-Chr4 24977555 24982361 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03331 695 843 Receptor kinase-like Gene Family AT1G21250 39.873 4.73e-25 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g03331 PK_Tyr_Ser-Thr 3.9e-46 CL0016