Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03327 CTGGCACACATAAACCTGAAACTAAGACAAAGAGTCATAGGCAAACAGGTGCAAATGGGTGTGCATTCAAAGCAACTGCTACTTATTACTGTGTTCTTTATTTTTATTGCTGTTGCTACGACTAAGGGTGAATCAGGGTCATTATCAAAGCCAAACTGTCCAACGAAGTGTGGCAACATAACCGTTCCCTACCCATTTGGCATGACCCTTAATTGTTCCTTCAACCCTTCCTTTCTCATCACTTGCAACCATACCTTTTCACCACCGGTTCTATACTTCGAAAGTGATGATGAAGATAAAAACATTGTCCCAGTGGAAAGCATTTCACTCTACGGAGAACTAACCATTTCATTGCCAGTGGTCACAAATTGCTTGTTTCAGGAAATATATGACAAAGTAGTGTCAGTGTTTAGGTGGTACAACCTGAGAGCTTTTCAACTATCATCCACGCAAAACAAGTTTACAGTGGTGGGTGGTAACACAGTTGGAATAGTACAATCAGAAAATAATTTGAACCTCTATAGTGCATGCGTGTCTTTGTACGATAATAAGTCAATGTCTAACGACTCATGTTCGGGAATTGGTTGCTGCCAAATTGCAATACCACGTGGCTTGTCCTATTTCTTTTATAGTTCTTATCCTAATGTCTTCAACTCTAGCAGTAACCGTGGATGGGAGAAAAACCCCTATAAATGCAGTTATGCGTTTCTGGTTAAAGATGGAGAATACCATTTTTCGGCCACTCCTACGGAAATCCTCAACCTCGGGGAGCACACCTGGTTTCCTGTGGCACTGGATTGGGCAGTGGAGAACCACACCTGCAAAGATGCATGTAAGTCACAGCACAGTGTATGCTACAATGCAACACATATGGGACATGGTTACCTTTGTAACTGCTCTGCTGGCTTCCGTGGAAATCCTTACCTCACTGATGGTTGTCGAGAATCACATGATTGTATGGAGCACACAAACTGCATTAATTCTAATGGAAGCTACCATTGTTCTTGCCGAGACGGATACGAAGGAGATGGAAAAAATAATGGATCAGGATGCAAATTTGGAACTAATCGAGTAATAATAATCGTTTTAAGTGTAAGCGTAGGTATATTAACACTTCTTGGGGGAATCTTTTATGCATATTGGAAACTGAAGAAAAAAAATCTCATCAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCCTATTATTACAACAACAGCTAGCCAAGTGTAGTGGATCAACTGAAACAACAAAAATATTTACTTTGGAGGAACTAGAGAAGGCCACTAAAAATTTTGATGAAGGCATGGTGTTAGGCAAAGGTGGACAAGGAACAGTGTACAAAGGAATATTACATAATAATATAGTTGTAGCAATAAAAAGATCCAAAATTAGCAACTCAAACCAAATTGAGCAATTCATTAATGAGGTGATAGTTCTTTCTCGAATTAACCATAGAAATGTGGTAAGGCTCTTGGGATGTTGTTTAGAGACTGAAGTTCCCTTACTTGTTTACGAATTCATTCCTAATGGTACTGTTTATGAGCATCTTCACAATGAAGGTCAATCTTTAAGACTTACATGGAAAACAAGATTGCAAATAGCAACAGAAACCGCTGAAGCCTTGGCATACTTACATTCAGCTGCCTCTGAACCAATCATACATAGAGATGTGAAAACTGCAAACATACTACTTGATTACAATCTCATTGCTAAGGTTTCTGATTTTGGAGCTTCAAAGATTATTCCTCTTGACCATACTCAGTTAACCACTCTAGTACGAGGGACACTAGGTTATCTAGATCCAGAATACTTTCAAACAAGCCAATTAACAGAGAAGAGTGATGTGTTTAGCTTTGGAGTTGTCGTAGTGGAATTACTAACAGGAAAAAAGGCACTCTCTTTTGATAGGCCAGAGTCTCATAGAAATCTTGCAATGCACTTTCATTCTACATTGAATGAGGGTAGCTTTCTTAACATTGTAGACAGGCACATTATAGATGAGGCAAATGTTGAGCAGCTAATGGATGTTGCTAATATTGCAGAACATTGTTTAAGGTTGAAAGGAGAGGAAAGGCCTACCATGAAAGAAGTGGCAAAGGAACTTGAAACAATAAGTATACTGAAAAAGCATCAATGGGAAAAAGTCAATTTGTCTCCAGAGGATGCTGAAAATTTTCTGAATGAATCATCTTCTTTCAATACTGCAGATGATGCCGAAGAAAGAAGTACTTATTCTAGCTTTGATATTTCAAAACAAAATTTCTGGTCCTCAAGTGCCAAGTACAGCGGGTTAACTGAAACAACACAAATCTTTACTTTGGAGGAACTAAAGGAGGCCACTAAAAATTTTGATGAAGGCAGGGTGTTAGGCAAAGGTGGACAATTTACAAAGGAATTCATTCCCAATGGTACTGTTTATGAGCATCTTCATAATGAAGGTCAATCTTTAAGACTCACATGGAAAACAAGATTACAAATAGCAATAAGAACTGTTGGAGCCTTGACATACTTGCATTCAGCTGCCTCTGAACCAATCATACGTAAAGATGTGAAAACTGCGAACATACTACTTGATTACAATCTCATTGCTAAGGAGAAATGGCACTATGTGGAATTACTAACAGGAGAAATGGCACTATCTTTTGATAGGCCAGAGCCTCAAAGGAATCTTGCAATGCACTTTCATTCTTCATTAAGTGATGTTATGTTCCTTAACATTGTAGATATGCACATAATAGATGAGACAAATGTTGGCAACTAA 2766 0.3836 LAHINLKLRQRVIGKQVQMGVHSKQLLLITVFFIFIAVATTKGESGSLSKPNCPTKCGNITVPYPFGMTLNCSFNPSFLITCNHTFSPPVLYFESDDEDKNIVPVESISLYGELTISLPVVTNCLFQEIYDKVVSVFRWYNLRAFQLSSTQNKFTVVGGNTVGIVQSENNLNLYSACVSLYDNKSMSNDSCSGIGCCQIAIPRGLSYFFYSSYPNVFNSSSNRGWEKNPYKCSYAFLVKDGEYHFSATPTEILNLGEHTWFPVALDWAVENHTCKDACKSQHSVCYNATHMGHGYLCNCSAGFRGNPYLTDGCRESHDCMEHTNCINSNGSYHCSCRDGYEGDGKNNGSGCKFGTNRVIIIVLSVSVGILTLLGGIFYAYWKLKKKNLIKLKEQFFQQNGGLLLQQQLAKCSGSTETTKIFTLEELEKATKNFDEGMVLGKGGQGTVYKGILHNNIVVAIKRSKISNSNQIEQFINEVIVLSRINHRNVVRLLGCCLETEVPLLVYEFIPNGTVYEHLHNEGQSLRLTWKTRLQIATETAEALAYLHSAASEPIIHRDVKTANILLDYNLIAKVSDFGASKIIPLDHTQLTTLVRGTLGYLDPEYFQTSQLTEKSDVFSFGVVVVELLTGKKALSFDRPESHRNLAMHFHSTLNEGSFLNIVDRHIIDEANVEQLMDVANIAEHCLRLKGEERPTMKEVAKELETISILKKHQWEKVNLSPEDAENFLNESSSFNTADDAEERSTYSSFDISKQNFWSSSAKYSGLTETTQIFTLEELKEATKNFDEGRVLGKGGQFTKEFIPNGTVYEHLHNEGQSLRLTWKTRLQIAIRTVGALTYLHSAASEPIIRKDVKTANILLDYNLIAKEKWHYVELLTGEMALSFDRPEPQRNLAMHFHSSLSDVMFLNIVDMHIIDETNVGN 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03327 921 Pfam Calcium-binding EGF domain 311 346 IPR001881 GO:0005509
Pste4g03327 921 Gene3D Laminin 315 346 - -
Pste4g03327 921 Gene3D Transferase(Phosphotransferase) domain 1 509 727 - -
Pste4g03327 921 ProSiteProfiles Protein kinase domain profile. 703 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03327 921 FunFam Wall-associated receptor kinase 2 509 726 - -
Pste4g03327 921 SUPERFAMILY Growth factor receptor domain 274 346 IPR009030 -
Pste4g03327 921 CDD STKc_IRAK 439 706 - -
Pste4g03327 921 ProSiteProfiles EGF-like domain profile. 309 346 IPR000742 -
Pste4g03327 921 ProSiteProfiles Protein kinase domain profile. 433 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03327 921 SMART egf_5 312 352 IPR000742 -
Pste4g03327 921 SMART egf_5 273 311 IPR000742 -
Pste4g03327 921 SUPERFAMILY Protein kinase-like (PK-like) 769 866 IPR011009 -
Pste4g03327 921 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 325 336 IPR000152 -
Pste4g03327 921 Pfam Wall-associated kinase 188 300 IPR013695 GO:0004674|GO:0016020
Pste4g03327 921 FunFam Wall-associated receptor kinase 2 403 508 - -
Pste4g03327 921 Gene3D Transferase(Phosphotransferase) domain 1 796 867 - -
Pste4g03327 921 SMART serkin_6 433 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03327 921 CDD EGF_CA 311 343 - -
Pste4g03327 921 Gene3D Phosphorylase Kinase; domain 1 408 508 - -
Pste4g03327 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Pste4g03327 921 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 800 866 IPR045274 GO:0007166
Pste4g03327 921 Pfam Wall-associated receptor kinase galacturonan-binding 53 111 IPR025287 GO:0030247
Pste4g03327 921 SUPERFAMILY Protein kinase-like (PK-like) 415 706 IPR011009 -
Pste4g03327 921 Pfam Protein tyrosine and serine/threonine kinase 437 703 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03327 Pste-Chr4 24952767 24962900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03327 800 919 Receptor kinase-like Gene Family AT1G21250 33.735 6.16e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste4g03327 PK_Tyr_Ser-Thr 1.4e-46 CL0016