Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03297 ATGGTACATTCTGAATCGAAGATGAACAATAGCAGCAGCAAAGACAAGGAAGCAGGAGGTAGCTTCACATACATAATAGCCTTCGCAGTTGGCTTGATGTTCTTACTTGTGACCATTGGTTTTGCATGTGTGCGCCTTCGCATGCGCATGGGTCGGGGTCCCAACATGCTCAATGGTAACTCAACATCAGAAGAAGACCCACTTGAACACATTGACACAAGTTTTGAGGGCTCTCGAAAGCTTCTTTACTCAGAGTTAGAGTTAGATAACAAGGGTTCAAGCTCAAGCAGCTGCTCCATCTGCTTAGGGGACTACAAAGAAAGTGACATGTTGAGGCACACAAAAAGCACATTCTCATATATGATGAAGAGTTCAGAGGAGTCTGTGTTATTGCTGGTGAGCTTTATTGTTCTGACCCTTATCGTTACACTTGCTGCTTATATGTGCTCTTCTGATGTTCCACGCACTACTTCATCTGAGCCTGTTGTTGTCACAGTCACACACTCCAACCACACCACAATCACTGTGGAGCCACGCTTAGATCACACTGGTAGTGAGCACAACCATCTCACTCTCCAATTTTCCAAGGACAATTTGTGTACTAGCACTAGTAGTAGCTCTTCTAGTTGCTCCATATGCTTGGTGGATTACAAAGAATGTGATTCCTTGAGACTGCTTCCTGATTGTGGTCACTTCTTCCATGTCATGTGTGTTGATCCTTGGTTGAGAATCAATTTAACCTGCCCGGTTTGTAGGACCCCAATAACCCTCACTGATATATGTAAAAATGTGTAA 795 0.439 MVHSESKMNNSSSKDKEAGGSFTYIIAFAVGLMFLLVTIGFACVRLRMRMGRGPNMLNGNSTSEEDPLEHIDTSFEGSRKLLYSELELDNKGSSSSSCSICLGDYKESDMLRHTKSTFSYMMKSSEESVLLLVSFIVLTLIVTLAAYMCSSDVPRTTSSEPVVVTVTHSNHTTITVEPRLDHTGSEHNHLTLQFSKDNLCTSTSSSSSSCSICLVDYKECDSLRLLPDCGHFFHVMCVDPWLRINLTCPVCRTPITLTDICKNV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03297 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 259 IPR013083 -
Pste4g03297 264 SMART ring_2 210 251 IPR001841 -
Pste4g03297 264 SUPERFAMILY RING/U-box 209 257 - -
Pste4g03297 264 Pfam Ring finger domain 209 252 IPR001841 -
Pste4g03297 264 ProSiteProfiles Zinc finger RING-type profile. 210 252 IPR001841 -
Pste4g03297 264 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 112 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03297 Pste-Chr4 24741536 24744859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03297 159 253 C3H Transcription Factor Family AT5G06490 46.316 7.38e-20 83.2