Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03289 AAGCCAAAATGCTCACAAACTCTTGAAATTTCCATGTAAGCCAACCCATTGCTCCAAATCACAAACTCAACAATTTTGTTTCATGATTTGGAAGCCACAAAATCTTGAAATTTCAATGTATGCCAAGCCATTACCCCAAATCACAAACTCAACAATTTGTTTCATGATTTGGAAGCCAAAATGCTCACAAAATCTTGAAATCTCCATGTTTACTAATCTTTTAGACCCATTACCCCAAAAGGAGCATATTAACTTGATTGATATGGCAAGAGAAGAGGGTGGTGGTGGTGGTGAAGACATAGTGAAGAGGTCAATGAGTGAAGGAAGGAAGAGTTTTTCATCATCAAGAACAAGTTGGGCCTCTGCAAGCTTTCATGAGGCAGTGAGTGGAGAGAGTGATGTGTTTCAAAGGTGTGGAAGGGAAATAGATGAAGAGGAGGAGCTCAAGTGGGCTGCTTTGGGAAGGCTTCCAACATATGATAGAATGAGGAAAGGCATTTTGAAACAAGTTTTGGAAAATGGAAGTGTTAACTATGAAGAGATTGACATCACCAAGCTTGGAGTGCAGGAAAAGAAGCATCTTCTTGAGAGCATTCTAAGGACTGTTGAAGAGGATAATGAGAGTTTCCTCCATAGGATGAGGGAGAGAATTGATAGGGTAGGGATTGAGATTCCTAAAATTGAAGTCAGGTTTGAGAATTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGAGCACTGCCAACACTGCTCAATTCTACCCTAAATGTAATAGAGGGAGCTTTGGACTATGTTAAGCTTTTGCAACACAATAAAAGAGTTGTCAAGATCATAGAAGATATTAGTGGAATTGTGAAACCATCAAGAATGACTCTGCTTTTGGGACCTCCAGGGTCAGGAAAAACTACATTCCTGCAAGCACTTGCTGGGAAAATGGACAATGATTTAAGGGTATCAGGAAGAGTCACTTACTGCGGCCAAGAATTATCAGAGTTTGTTCCTCAGAGAACATGTGCTTATATTAGTCAGCATGATCTTCACCATGGAGAGATGACAGTGAGAGAGACACTGGACTTCTCAGGACGCTGTCTAGGAGTTGGAACAAGGTATGATATGCTTGCAGAGTTGTCGAGAAGGGAACTAGCAGCAGACATTAAACCAGATCCTGAGATAGATGCTTTCATGAAAGCCACAGCAATAGAAGGACAAGAAACAAGTCTTGTTACTGACTACATTCTAAAGATTCTTGGGTTGGAGATATGTGCTGATATTTTGGCGGGAGATGAGATGACAAGGGGCATATCTGGTGGACAAAAGAAGCGTTTAACCACTGGTGAGATGTTGGTAGGACCAGCAAAAGCATTATTCATGGATGAAATTTCAACTGGTTTGGATAGTTCCACAGCCTTCCAAATTGTCAGGTTCATGAGGCAAATGGTCCATATTATGGATGTTACTATGATAATCGCTCTTCTGCAGCCTGCACCAGAAACATACGATCTTTTTGACGACATAATATTGCTTTCAGAAGGTAAGATTGTCTATCAAGGTCCCAGAGAGAATGTTCAGCATTTTTTCGAAATTGTGGGGTTTAAATGCCCTGAAAGGAAAGGAGTTGCAGACTTTCTACAAGAGGTAACTTCCATAAAGGATCAAGAACAGTACTGGTTCAGAAGGGACATACCTTACCATTATGTCACTGTGCCTGAGTTTGTAGCCCATTTCAATAATTACAGCATTGGTTACCAACTTCATGAAAAGATTCATGTTCCATATGATCCTAATGAAAGCCCTCAAGGTGCATTAGTGAAGGAAAAGTATGGCATCTCCAAATGGGAACTCTTCAAGGCATGCTTTTCAAGAGAGTGGCTTTTGATTAAGAGAAACTATTTTGTATACATATTCAAGACTTTTCAGATAACTATACTAGCTATAATTACCATGTCAGTATTTTTTAGAACAGAAATGAAGCATGGTCAACTTGAAGGTGCAGGAAAATATTATGGTGCACTATTTTTCAGTCTCATTAATGTAATGTTCAATGGAGTGGCTGAGCTTGCAATGACCATTAATAGACTTCCTGTTTTTTACAAGCAACGAGATTTTCTGTTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTCCTAAGAGTTCCTCTCTCTCTATTGGAATCAGGATTATGGATCATCCTGACTTATTATACTATTGGCTTTGCTCCTGCAGCTAGTAGGTTTTTTCGTCAATTATTGGCTTTCTTCTGTGTGAATCAAATGGCTCTATCTCTATTCCGCTTCATTGCTGCAGTAGGAAGAACAAAAGTCGTGGCAAACACACTTGGCTCCTTCACAATTTTAGTTATTTTCCTCCTAAGTGGATTTACTGTTTCAAGAGATGATATTGGACCATGGATGATATGGTGCTATTATAGCTCACCTATGATGTATGGTCAGAATGCTATATCCATCAATGAGTTCTTGGACAAAAGATGGAGTGCTACCAATATTGACCCGAGAATTCCTGAGCCCACAGTAGGGAAGGCTTTTCTTAAGGCCAGAGGCATATTCACAGAAAACTATTGGTACTGGATCTCTGTTGGCGCCCTTATAGGATTTTCTCTGCTTTTCAACATATGTTTCATTCTGGCACTAACATATTTGAGTCCATTTGGAAGCTCGAAATCTACCATAGTGGAAGAGGAAGACCAAAAGAAAAGCACATCTGCTTCACCCTCGGTGGAAAATATGACTGCAGCAACTACAGACCAAAGTTCAGCTTCAATTGTCAAATCATTTGAAGGTATTGATATGGAAGTAAGAAACATGACACATAGCTCAATTCCTAAAGCTGCAGAGAATTCAAAATCCAAGAAGGGAATGGTGCTGCCTTTTCAACCTCTATCACTTGCATTTCAAAGTGTGAATTATTACATCGATATGCCACATGAAATGAAGAGACAAGGAATTGAAGAGGATAGGCTCCAACTACTAAGAGATATAAGTGGTGCTTTCAGGCCAGGGATTTTAACAGCATTGGTTGGTGTAAGTGGTGCTGGAAAAACCACTTTGATGGATGTGCTTTCAGGAAGGAAAACTGGTGGCTATATTGAAGGGAGCATCAGTATATCTGGTTATCCAAAAAACCAAGCAACTTTTGCTCGGATCAGTGGTTATTGTGAACAAAATGATATCCATTCCCCAAATGTTACAGTCTATGAATCACTTCTGTTTTCTGCTTGGCTCCGTCTCAGTAAGGAGGTTAATAAGGAAACACGAATGATGTTCATTGAAGAAATTTTAGAGCTGGTCGAGCTCAACGCAGTGAGGCACTTCATAGTAGGCCTTCCTGGTATAAATGGCTTATCAACAGAGCAGAGAAAGAGGCTTACCATTGCTGTTGAATTGGTTGCAAATCCTTCCATTATTTTTATGGATGAACCAACAACTGGTCTTGATGCTAGAGCTGCAGCAGTTGTCATACGTACTGTTAGAAATACAGTAGATACAGGTCGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGATATATTCGAAAATTTTGATGAGGAACTAATTAAGGAACTATGCACACCAGTACCTGGAACAAAGGACCTTTACTTCCCGTCTAAATACTCACAGTCATTTATTACTCAATGTAAAGCTTGCTTCTGGAAACAGAACTGCTCCTATTGGAGGAATCCACAGTATAATGCCATCAGATTGTTCGTCACAATATTTATTGGTGTCATTTTTGGACTTATTTATTGGGACAAAGGAAAAAAGACGCAAAAGGAACAGGACCTGTTGAATCTGCTTGGAGCTATGTATGCATCTGTTTTTTTCCTTGGTGCCTCCAACACTAGCACTGTTCAACCTGTTGTTGCAATAGAAAGAACTGTTCTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGAATTACCTTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGTCTATACCATTATCCTCTACTGGATGATTGGATTTGAACAACATGTTGAAAATTTCTTGTGGTTCTACTATTTCATATTCATGAGCTTTATGTACTTCACACTTTATGGAATGATGACTGTAGCTTTGACACCAAACTATCAAATTGCTGCAATCGTTATGTCCTTTTTCATCAGTTTCTGGAACCTGCTAAGTGAATTAATTCATTGCCTTTTTTTTTCTGTGAAAATAAATATTTACATTTCACTTATTATGCAGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATGCCCTGTGGCTTGGACTATATATGGACTGGTGACATCCCAAGTGGGTAAAAAAAATAGTCCAATAGAGGTTCCTGGCTTTAGACCCATGACAGTAAAAGATTACCTTGAGAAGCAGTTGGGCTTTCAACATGACTTCCTTGGAGTTGTTGCAATAACTCATGTTGCCTTTTGCCTCCTTTTCCTTTTTGTATTTGCATATGGCATCAAGTGTTTCATAATCAAAGGGTTTAATGTATCTTTTGACACTAAC 4546 0.3938 MIWKPQNLEISMYAKPLPQITNSTICFMIWKPKCSQNLEISMFTNLLDPLPQKEHINLIDMAREEGGGGGEDIVKRSMSEGRKSFSSSRTSWASASFHEAVSGESDVFQRCGREIDEEEELKWAALGRLPTYDRMRKGILKQVLENGSVNYEEIDITKLGVQEKKHLLESILRTVEEDNESFLHRMRERIDRVGIEIPKIEVRFENLSVEGDAYVGTRALPTLLNSTLNVIEGALDYVKLLQHNKRVVKIIEDISGIVKPSRMTLLLGPPGSGKTTFLQALAGKMDNDLRVSGRVTYCGQELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYDMLAELSRRELAADIKPDPEIDAFMKATAIEGQETSLVTDYILKILGLEICADILAGDEMTRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTAFQIVRFMRQMVHIMDVTMIIALLQPAPETYDLFDDIILLSEGKIVYQGPRENVQHFFEIVGFKCPERKGVADFLQEVTSIKDQEQYWFRRDIPYHYVTVPEFVAHFNNYSIGYQLHEKIHVPYDPNESPQGALVKEKYGISKWELFKACFSREWLLIKRNYFVYIFKTFQITILAIITMSVFFRTEMKHGQLEGAGKYYGALFFSLINVMFNGVAELAMTINRLPVFYKQRDFLFYPAWAFALPIWVLRVPLSLLESGLWIILTYYTIGFAPAASRFFRQLLAFFCVNQMALSLFRFIAAVGRTKVVANTLGSFTILVIFLLSGFTVSRDDIGPWMIWCYYSSPMMYGQNAISINEFLDKRWSATNIDPRIPEPTVGKAFLKARGIFTENYWYWISVGALIGFSLLFNICFILALTYLSPFGSSKSTIVEEEDQKKSTSASPSVENMTAATTDQSSASIVKSFEGIDMEVRNMTHSSIPKAAENSKSKKGMVLPFQPLSLAFQSVNYYIDMPHEMKRQGIEEDRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLSGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSKEVNKETRMMFIEEILELVELNAVRHFIVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVIRTVRNTVDTGRTVVCTIHQPSIDIFENFDEELIKELCTPVPGTKDLYFPSKYSQSFITQCKACFWKQNCSYWRNPQYNAIRLFVTIFIGVIFGLIYWDKGKKTQKEQDLLNLLGAMYASVFFLGASNTSTVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLVYTIILYWMIGFEQHVENFLWFYYFIFMSFMYFTLYGMMTVALTPNYQIAAIVMSFFISFWNLLSELIHCLFFSVKINIYISLIMQQIPIWWRWYYWACPVAWTIYGLVTSQVGKKNSPIEVPGFRPMTVKDYLEKQLGFQHDFLGVVAITHVAFCLLFLFVFAYGIKCFIIKGFNVSFDTN 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03289 1488 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1163 1476 - -
Pste4g03289 1488 Pfam ABC-2 type transporter 1191 1417 IPR013525 GO:0016020|GO:0140359
Pste4g03289 1488 Pfam ABC-2 type transporter 587 799 IPR013525 GO:0016020|GO:0140359
Pste4g03289 1488 FunFam ABC transporter G family member 40 956 1176 - -
Pste4g03289 1488 SMART AAA_5 979 1171 IPR003593 GO:0016887
Pste4g03289 1488 SMART AAA_5 260 485 IPR003593 GO:0016887
Pste4g03289 1488 Pfam ABC transporter 970 1121 IPR003439 GO:0005524
Pste4g03289 1488 Pfam ABC transporter 252 433 IPR003439 GO:0005524
Pste4g03289 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 235 508 IPR003439 GO:0005524
Pste4g03289 1488 Pfam ABC-transporter N-terminal 176 225 IPR029481 -
Pste4g03289 1488 CDD ABCG_PDR_domain2 939 1166 IPR034003 -
Pste4g03289 1488 MobiDBLite consensus disorder prediction 881 897 - -
Pste4g03289 1488 CDD ABCG_PDR_domain1 240 490 IPR034001 -
Pste4g03289 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 942 1193 IPR003439 GO:0005524
Pste4g03289 1488 FunFam ABC transporter G family member 34 238 542 - -
Pste4g03289 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 508 IPR027417 -
Pste4g03289 1488 Gene3D - 957 1168 IPR027417 -
Pste4g03289 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 965 1154 IPR027417 -
Pste4g03289 1488 MobiDBLite consensus disorder prediction 871 897 - -
Pste4g03289 1488 Gene3D - 238 534 IPR027417 -
Pste4g03289 1488 Pfam ABC-2 type transporter 466 519 IPR043926 GO:0140359
Pste4g03289 1488 Pfam Plant PDR ABC transporter associated 812 870 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03289 Pste-Chr4 24679377 24705945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03289 967 1154 Calmodulin-binding Proteins AT2G36910 27.586 2.85e-07 53.5