Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03277 CCCAGAGATTGGAAGCAAATGAATGGCAGTGAAATGATTTAATTTAGTTTAAAAGAAGAAAGCAAAAGCAGCAGAAAGTGACAAAATCCCAGTAAAGCGCGACAGCCTCTGAACCCAAAGTGTTGTGCTTTTCACATACTCTCCCTTTAGGCAAATGGGTGTCCTCCCATAACATAGTGAAGTTTTGTTCTACCCGTAGGTGGGATTAGGATGTTTTCCAGGTTGATACATCCCCATGAAGGGAGCGTTGCCCAGGAAGACATCCAGGCTGCTACCAATCACGCTCACCTCGCTGACCCTTGTCTTGTTCTCACCTCTGATCCCAAACCTCGTCTTCGTTGGACCGCTGACCTTCACGAGCGCTTTGTCGATGCTGTCACTCAACTTGGTGGTGCCACTAAGGCCACTCCAAAAGCTATCATGAGGACTATGAATGTCAAGGGTTTGACACTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCGGGAAAAGATTCTGACGAGGGATGCAAAGATGGAATGTCACCTTCATATCTTCAAGAAAGCCCCGGTACTGATAACTCTTCTCCAAAGTTACAAGCTTCTGATGCTAACGAGGGTCATGAAGTGAAGGAAGCATTAAGAGCACAGATGGAAGTGCAAAGTAAATTACACTTACTGGTGGAGGCAGAGAAGCACTTGCAAATTCGACAAGATGCAGAGCGGAGGTATATGGGCATGCTTGAGCGAGCATGCAAGATGTTGGCTGAGCAATTCATCGGGGACATAGTTATTGACACGGACAGCCAAAAAATTGAAGGGCTGGAAAACAAAACATCTAGAAGTTCCGTAGTAGATCATGTTAGCTTTTACCCCCCGGATGTGGGTGGAATGCATGTTTCAGAAGTACCTCCTATTCTGCAGCCCCAAGGCTCCACTGAAAGTTGCCTAACATCACTTGAGAGTCTGGGAGGGTTGACACTGGAAGGATCTCCTGGTGGATCCAAGAAGAGAATGCTGAACTTTGACTCAATGGTAGCACCTTTGATCTGGAGTGAAGCCAACACCAGAACCCAAGGAATCCATTTAGCTCAAGTTAATCCTCCAGGAATGACTAGATATGGCATGTAGCATGTAGCATGTAGCATGTAGGTAGGGTAGTTCCTCGCAAAGAGAGCTAGCTCAGCTGAGGACATTCTGCTTTGTTCCAAACTTTTAGGATTGAGTAGTACTGAGTTAGATTCTTATCTCATTTTCTCCATCTAGTTGGTGGGAATCATCATTGTGTAGAGTGAAAATACTATGTGCCTTAACTTTCACCATCACTATCACAAAAGCTTCGCGCTGACCATTTACGATCATTGCCTTGGTTTTTTACCGCCCTTAATCGCCTTGCTTTGTAAGAAGGCACAGGATTCCGGTGCCTTCCCTTTCTCCTTCTAGTTATTTAGATTGATCATTACCAATTTATGCATTTTGTTATCATAAAACTTACATAATTGATGAACGCC 1505 0.4439 MFSRLIHPHEGSVAQEDIQAATNHAHLADPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGATKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSPSYLQESPGTDNSSPKLQASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLAEQFIGDIVIDTDSQKIEGLENKTSRSSVVDHVSFYPPDVGGMHVSEVPPILQPQGSTESCLTSLESLGGLTLEGSPGGSKKRMLNFDSMVAPLIWSEANTRTQGIHLAQVNPPGMTRYGM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03277 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Pste4g03277 304 Gene3D - 38 96 - -
Pste4g03277 304 MobiDBLite consensus disorder prediction 113 130 - -
Pste4g03277 304 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Pste4g03277 304 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Pste4g03277 304 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Pste4g03277 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Pste4g03277 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 210 IPR044848 GO:0003700
Pste4g03277 304 MobiDBLite consensus disorder prediction 93 137 - -
Pste4g03277 304 FunFam Myb family transcription factor 38 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03277 Pste-Chr4 24531789 24535168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03277 28 219 G2-like Transcription Factor Family AT3G24120 52.041 3.01e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g03277 Myb_DNA-binding 1.7e-06 CL0123