Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03267 CACCCCCTTTTGCTTCTTCTCCTCCAACAACATGGGTACTGAAACTGTGTGCCTTCCCACCCCACCAACCACTGCCATCACCACTGTGGCTACTCCACCTACCTCTCTTGCTCCTGGTTTCAGGTTCCACCCAACTGATGAGGAGCTTGTTATTTACTACCTCAAGCGCAAGGTTTCTGGCAAAAGCTTCCGATTTGATGCCATATCCGAGGTTGACATATACAGGAGCGAGCCCTGGGACCTGGCAGATAAGTCAAGGTTGAAGACCCGGGACCAGGAGTGGTACTTTTTCAGTGCATTGGATAAAAAATATGGGAATGGTGGGAGGATGAACAGGGCTACTAGCAAAGGGTATTGGAAAGCCACCGGAAATGATCGACCAGTGAGGCATGAGCAAAGGACTGTGGGTTTGAAGAAAACGTTGGTTTTTCACAGTGGCCGAGCTCCTGATGGGAAGAGGACTAATTGGGTCATGCATGAATACAGGCTGGTTGAAGAGGAACTAGAGAGGGCTGGGACTGGATCCTCTCAGCCTCAGAAGGATGCGTATGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGGCAACGGTATGCACCCTTCATTGAAGAAGAGTGGGATGATGCTTCGGGAATGGTTCCGGGGGCAGAGCTTGTGGATAATGCCATTGCTCGCCAACCATGCGTTGAAGGCAACAACGGTGTTTTATGCACTGAACGGAGAAATGGTGTGGTA 748 0.4947 MGTETVCLPTPPTTAITTVATPPTSLAPGFRFHPTDEELVIYYLKRKVSGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERAGTGSSQPQKDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDASGMVPGAELVDNAIARQPCVEGNNGVLCTERRNGVV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03267 239 Gene3D NAC domain 35 184 IPR036093 GO:0003677|GO:0006355
Pste4g03267 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 191 - -
Pste4g03267 239 Pfam No apical meristem (NAM) protein 28 153 IPR003441 GO:0003677|GO:0006355
Pste4g03267 239 SUPERFAMILY NAC domain 18 182 IPR036093 GO:0003677|GO:0006355
Pste4g03267 239 FunFam Nac domain-containing protein 86 35 184 - -
Pste4g03267 239 ProSiteProfiles NAC domain profile. 26 181 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03267 Pste-Chr4 24388566 24389788 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03267 1 229 NAC Transcription Factor Family AT3G10480 58.712 5.22e-101 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste4g03267 NAM 6.6e-37 No_clan