Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03255 ATGTCAGGAGAGCAAATTTTGTCATCCAATCAAGAAGAATGTAATAAATCTCAGTCTCCATTCCGTAACAGCAGTGGCTACAATCCATTAACAGGCATCTTTCACTCCCTTGTTAAGCTTGGCACAAAACATGAAATCCCAACAAAACCTGACCTCAACACTGCCAATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTTCTGAGGCAAGAACTGCATTCATTGATATAAGTACTGATCGAAGTGTTAGCTATGGTGAGCTAAGAAGGTCTATTTACTCCCTTGCATCAGCTTTGTTCCACGGACTTGAGGTAAGGAAAGGTGATGTAGTATTTTTGTTGTCACCAAACTCAACCCTGTACTCAGCCATATGCCTAGCTGTGTTATCAGTTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACTGCATCAGAAATTGCCAAACAAGTGCGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCTGAGGAGGTACACAAATTAGTCCCAACTGGGGTTCCTACAATTCTCACTTCTTGTCCTTCTGATGGGGAAATGTTATCAGTTGAAGAGTTAATAGAAGGCAGTTGTTATACTTCACCAGAGTTGCCTCTAGTTCCTGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCAGGAACCACAGGGGTAAGCAAAGGTGTGGTTCTGACACATGCAAATCTCATTTCCATAATGAGACTACTCTTATGGTCTGCTGATGTCAGTGGATCCCAAGATGATGTTTTCTTGGCCTTCCTTCCAATGTTTCATATCTATGGACTTGTGTTCTTTGGATTAGGATTGTTATGTGTTGGTGTCAAAACAATTTTGATGCAGAAATATGACTTCCAAGTTATGCTTGACGCAATTCAGAAGCACAAGGTTAATAACATACCAGCAGTGCCACCAGTGATACTTGCACTGGTAAAACATGCAAGGCAAACTAGGTGTGACTTGTCCAGCCTCAGAAGGATGGGGTCAGGTGCTGCACCTTTGAGCAAGGAAGTGATACAAGAGTTTAGAAAAATGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGACTAACAGAGAGTAGTGGTGGAGCAACATTTTTTGCCTCAGATAAAGATGCTAAAGCTCATCCAGATTCATGTGGGAAGTTGATTCCGACTTTTTGTGCAAAAGTTGTAGACATTGAAACGGGGAAGCCTTTGCCTCCTGAAAAACAAGGAGAGTTATGGTTCAAAAGTCCTACCATTATGAAAGAATATCTAGGAAATTTGGAGGCAACAAATGCAACTATTGATTCAGAAGGTTGGTTGAGAACTGGTGATCTTGGTTACATTGATGGGAATGGATTTGTTTATATAGTTGAACGGATAAAGGAACTAATCAAGCACAATGGGTATCAGGTACCCAAAGCCATAAACAGTGGCTCCTGCAGAATTGGAATCTGTGCTGTTAAGTCACCCCTTATAGTTGATGCAGCAGTTATACCGGTCGAAAATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCCGGTTCTGAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTAAGAAGGGTCAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGCAAGATATTGCGCAAGGATCTTGTTTCTCGAAGCATTTATCAACTCGTCTCCAAGTTATGAATAACATGTATAAATGGTAGTATATATTCCTGTAAGATATTAAATCGCTAGTTCTAGATGTCCTTATGCAGGTTAAGAATCTCAGTTATTTTCTAGTAGACATTTAATGTGTCTGAAATTATTATAAACGGATTTGGCTAAAAAAGAGAACAATCGACTCACCGAACACAGAAATCAGAATTCAACTGGGTGCATCAAAATAAATACGTCTTTAATAAAGAGTATTGTCCTTTGCCGTTTTGATCTTATTGTAAGTTCGTGAATTTTGTACTGCTCTGTAGCCTTTCGAGGTTTTGATTGTCTGTACCATTACCATTTGTATTTAAGGTACGGGTAAACTTTTTTACAGGAAGTTGTGAATAAAATTTAAGTTATATATATTGCGGCTAATTAGCTTCGGAAACCATAGTTGCATAGATTCTCTAAATATCAG 2167 0.4019 MSGEQILSSNQEECNKSQSPFRNSSGYNPLTGIFHSLVKLGTKHEIPTKPDLNTANFVLSQFPQAHLSEARTAFIDISTDRSVSYGELRRSIYSLASALFHGLEVRKGDVVFLLSPNSTLYSAICLAVLSVGAVLTTANPINTASEIAKQVRDSGAKLAISAPEEVHKLVPTGVPTILTSCPSDGEMLSVEELIEGSCYTSPELPLVPVAQSDTAAILYSSGTTGVSKGVVLTHANLISIMRLLLWSADVSGSQDDVFLAFLPMFHIYGLVFFGLGLLCVGVKTILMQKYDFQVMLDAIQKHKVNNIPAVPPVILALVKHARQTRCDLSSLRRMGSGAAPLSKEVIQEFRKMFPWVELRQGYGLTESSGGATFFASDKDAKAHPDSCGKLIPTFCAKVVDIETGKPLPPEKQGELWFKSPTIMKEYLGNLEATNATIDSEGWLRTGDLGYIDGNGFVYIVERIKELIKHNGYQVPKAINSGSCRIGICAVKSPLIVDAAVIPVENEETGQIPMAYVVRAAGSELSEDQVIQFVAGQVAPYKKVRRVSFIDTIPKSAAGKILRKDLVSRSIYQLVSKL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03255 577 Gene3D - 465 571 IPR045851 -
Pste4g03255 577 Gene3D - 42 464 IPR042099 -
Pste4g03255 577 Pfam AMP-binding enzyme C-terminal domain 490 559 IPR025110 -
Pste4g03255 577 ProSitePatterns Putative AMP-binding domain signature. 217 228 IPR020845 -
Pste4g03255 577 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 464 - -
Pste4g03255 577 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 566 - -
Pste4g03255 577 MobiDBLite consensus disorder prediction 1 23 - -
Pste4g03255 577 CDD 4CL 46 565 - -
Pste4g03255 577 SUPERFAMILY Acetyl-CoA synthetase-like 64 568 - -
Pste4g03255 577 Pfam AMP-binding enzyme 69 468 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03255 Pste-Chr4 24286478 24288871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03255 59 573 Monolignol Biosynthesis Gene Families AT1G20500 42.337 4.15e-141 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03255 4 24286478 24288871 Pste4g03255 4 24286478 24288871 ECH