Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste4g03242 | GTTTGTGTTGTGTTGTGTTCTATTTCCATTCTTTCACCAATTTTTTCTCTCTTCCTTTCTCAATTTTCCTCCATTCCCACGAAATCTAGGGTTTCCATTTCCCTCTTCATCCCAGGTACGTGCACTGCCTTTGATTTCCACGTCACCCTCCCATTTTCAGTGATCCCGATTTTGATAATTTGGCTTGATTTCGGCAATACCTTCTTTTGTGTTTTTGTTTTTTACACCTGAATTGTTCGTTCGTAGTTGTGTATGTTGATTTTGACTCTATCGTTTATCAGGTGGCATGTGTGGTGGGGCTTTGAATTTCGATTTAATTAGGGAAACCCTTTTTCTGTTTTTCCCCTGTTATTTTCCCATGGCCTCCACTCTCAGATTGGGGTTCCCTTTTTTCTTTTTCTTTTTCGTTTTCCTTTTCGGTTTCCGAGAGATTGAAATAATGGTGGTGGCTTAGCAACTGCTTTGCGTTTATGTCAGTCTTAGGAATGGAGTTTGTTCGAGGTGCATTTATGCTTTGTGGGTTCGTACATACAGGGATATAGATTGGTTGGGTTCCATTTAGTGTAGTGCTGAGGGGAGGGGTAGAGGAAGAAGGTGGGGATGACAGATTTTCAGCCACTACAGCAGAAACCTGAACCTGCTGATGCCCATGCCGAGTTTGAGCGGGGGCTAGAGGAGTTTATGCGAGGGCACTTGGATGATTGTATGTCATTTGCTTCGTGTAGCTCCTCCCGCGTGCCCGATGAAGAGGATGATGAAGGTGATCAACTGGTTCGGAGGAGGCGGAGGTCTGACCTTGAAGGGGATGATTTGGCAGAGTCCTCGGCTGCACGAAGGCGGCATTCGAGGATTTTGAGCAGGTGGGCTGCACGGCAGGCACAGGAGATGATAACCACTATTGAGAGAAGAAATCGAGAATCCGAGTTGATGGCGCTTGCTGGATTGCATACTGTGTCGATGTTGGATTCTTCTTTTCTTCGGGGCTCACAGTCTCCAACTTCTGGCCAGGAGGGGGCTGTGGAGAGGCCAAGCACTCAGGCATCTGCCATTCTGCAGATGTGGCGTGAATTGGAAGATGAACATTTGTTGAACCGGGCGCGTGAAAGGATGAGGGAAAGGTTGCGGCAGCAGAGGAATTCTGACTCTAATACTAATGTGTCCAGTACCATGTCCGACAGTCGAGGCAGTGAGAATCAAGGGAGTTTGGAGGATGCAAGTGAGAGTGAAAATGATTATGGTACTTGGTCACATGATCAAATTGGATCGAGGAATGCACATGGGGATCATAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGAGTGAGACAAATTGTTCGAGGATGGATGGAAAGTGGCATTAGTGATCATTCATCTAATGTGAGTCAGAGAAACAATAACCGGAGAGCAGAGTGGCTTGGAGAAACAGAGCGAGAGAGGGTAAGAATTGTTAGGGAATGGGTGCAAATGACTAGCCAGCACAGAAGTTCCCGTGGGAGCCGGAGGGATGCTCAAGTAAGTGAGGGTGCTCAAGCTGATCGAGTCCAAGATGTAGTAGCTGATAATGATGAGAGTCAGCCAGAGCATGTTCGGCGGGACATGTTAAGGTTGCGTGGCAGACAAGCCCTAGTTGATTTACTTGTGAGGATAGAAAGGGAAAGACAAAGAGAGCTCCAGGGCTTGTTGGAGCATCGAGCTGTTTCTGATTTTGCTCATCGCAACCGTATTCAGTCACTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGGCCACCATCTATGGCTGCTAGTGAATTAGTTCAGCTAAGACAACGACACACGGTCTCTGGTATAAGGGAGGGGTTTCGTTCAAGATTAGAAAATATTGTTCGTGGTCAAGCAGGCACCAGTCCTGATACCACATCAAATACTAACGGAAGTGAAACAAGAGGCGATGAGAACCAAGCAAACAGTCTGGTAGATGGCCAACAAGAAAATTATGAACAACAGCAGATTAGGAACTTGGAAACTGATATGCGTCAGTTGCCTAATCGAACAGGAACTTTGGAGAGTAGCACAGGTGAGAGTATTAGTTGGCAAGAATCTAGTAATCAAGGAGGGAATTGGCAGGAACAAATTGCTGAAGAAGGGGGAGGAAACTGGCAACAGAGTCCTTTCAATCAGATGAGAGATGGAAGGGCAGTCGGTGATTGGCCACAGGAACCTCCCAGAAATTTAGCTGGGGAAGATCCTCATCCTCGGGAAGCTCAAAGAATTTGGCATGATGATAACACAAGGGAAACTGCTGGTAATTGGTCCGAAGGGCCTTCTGGAGCTTCTAGGAATCGCCGTGGGGTTCCTTTTAGAAGATTCAATAGATTTCACCCACCTGATGATGATAATGTATATAGTATGGAGCTTAGAGAACTTCTGAGCAGGAGAAGTGTTTCTAACCTTCTTCGTAGTGGTTTCCGGGAAAGTCTGGACCAACTAATACAGTCATATGTGGAAAGGCAAGGTCGTGCTCCAATTGACTGGGATTTGCATCGAAACTTGCCAACACCAACTCCTGCCTCTCCAGAACGGGATCCAGAACAGCAAGGTGATGAACGTGATGAGGGTCAGCGTGAAACCATTAACAGACCTTCACTGGTGTTGCCTTCTCCACCAGTACCTCCACCACAACCTCTGTGGCACCAGGATTTGCATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATTGAGTGGGAGATAATGAATGATTTAAGATCAGACATGGCAAGACTTCAGCAAGGTATGAATCACATGCAGAGGATGTTGGAGGCCTGCATGGATATGCAACTGGAATTGCAGCGCTCAGTCAGACAGGAAGTATCTGCAGCGCTGAATCGCTCAGCTGGTGAAAATGGATCGAGTGCTGAGACATCTGATGATGGATCTAAATGGGGACATGTGAAAAAAGGAACATGCTGCGTTTGTTGTGATAACCATATCGATTCTCTTTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAATTAATTCGTGGTGGTGGTAAGTGTCCTTTATGCCGAGCACCAATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAAAAAGGAAATTAAAAGGACATGGAGAAGACAGTCTGAGGGAGCTTATCTCAATTCTAAAGGTCTCGAGGTTCTTATTTATAAGTGTTCAGTAGATGCCTTTGTTTTTCTGATTATATATGGAACCTCCACGAATTGTATAATTGGATTAACAGAAGGCGCCGTTGATTCATCATTCTTACGTAAATAAATAGTTGCCCTGATTATTCTTTCCAAAAGTTTTACGTTGAAAATTCCAAGCTTGTATATGAATAAAAGCAGAATTCCC | 3415 | 0.4559 | MTDFQPLQQKPEPADAHAEFERGLEEFMRGHLDDCMSFASCSSSRVPDEEDDEGDQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARERMRERLRQQRNSDSNTNVSSTMSDSRGSENQGSLEDASESENDYGTWSHDQIGSRNAHGDHNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNVSQRNNNRRAEWLGETERERVRIVREWVQMTSQHRSSRGSRRDAQVSEGAQADRVQDVVADNDESQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQLRQRHTVSGIREGFRSRLENIVRGQAGTSPDTTSNTNGSETRGDENQANSLVDGQQENYEQQQIRNLETDMRQLPNRTGTLESSTGESISWQESSNQGGNWQEQIAEEGGGNWQQSPFNQMRDGRAVGDWPQEPPRNLAGEDPHPREAQRIWHDDNTRETAGNWSEGPSGASRNRRGVPFRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPTPTPASPERDPEQQGDERDEGQRETINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGSSAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELIRGGGKCPLCRAPIVEVVRAYSIL | 849 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste4g03242 | 849 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 110 | 849 | - | - | |
Pste4g03242 | 849 | SUPERFAMILY | RING/U-box | 796 | 842 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 434 | 467 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 667 | 682 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 40 | 78 | - | - | |
Pste4g03242 | 849 | Pfam | Zinc finger, C3HC4 type (RING finger) | 794 | 841 | - | - | |
Pste4g03242 | 849 | ProSiteProfiles | Zinc finger RING-type profile. | 797 | 836 | IPR001841 | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 650 | 695 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 481 | 533 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 766 | 785 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 222 | 244 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 551 | 572 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 125 | 146 | - | - | |
Pste4g03242 | 849 | CDD | mRING-HC-C3HC5_NEU1 | 794 | 846 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 179 | 221 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 766 | 789 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 481 | 588 | - | - | |
Pste4g03242 | 849 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 774 | 847 | IPR013083 | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 173 | 244 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 52 | 78 | - | - | |
Pste4g03242 | 849 | Coils | Coil | 726 | 746 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 432 | 467 | - | - | |
Pste4g03242 | 849 | MobiDBLite | consensus disorder prediction | 296 | 333 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste4g03242 | Pste-Chr4 | 24087372 | 24093573 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste4g03242 | 797 | 843 | C3H Transcription Factor Family | AT3G06140 | 42.553 | 1.71e-06 | 49.3 |