LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste4g03212	ATGAACCATTGTGTTTCTTTACTGCTACTTGGATATTTTGGAGTTGATATTAATGCCATACGAGAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTTGATGCATTTGATCTACGAAAGCGGCTTCCAGCTGTAGTCAGCAAATTATACAAGGCAATAAAGGGCAATGGAGGTGTAACATATATACATTGCACTGCTGGACTAGGAAGAGCTCCAGCTGTTGCGTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGATGCCCACACACTACTTCAGAGCAAAAGGTCCTGCTTTCCAAAACTGGATGCCATAAAAAGTGCAACAGCTGATATTCTTACAGGCCTCAGTAAGAAGCGTGTCACTTTGTCATGGGAAGACAGCAATTGCTCTACTGTGGAAATTTCTGGACTTGATATTGGATGGGGGCAGAGAATACCCCTACATTTGGATGACAAAGAGGGTACGTGGTTTCTCAAGAGGGAATTGCCTGAAGGACTCTATGAGTATAAGTACATTATTGATGGGGAATGGACATGCAATAAAGATGAGCTTCTAACCTCTCCCAACAAAGATGGCCATGTCAATAATTTTGTTCAAGTCCTTGACAATACCAACAGTGTTCGAGCCTCCCTCCGGGAGAGATTGACTGGTGATGATCCTGATCTCACAAAGGAGGAACGTCTGAGAATAAAGGAGTTTCTTGAAACTTTTCCTAATGAGGATCAGTAAATCATCGCGCGTGGTTGTTGATATGTAAAGTAATAGATGCAGGCATACATATTACCTAATAAGATTGAATCTAAACTTTGGATACGGTCGCTGTTTCAGTTATAATTCTGCGATGCCGCTGTTTATTGAGTTCCATAGCAATAAAATGTCTTAGCGATATTTAAATA	926	0.4082	MNHCVSLLLLGYFGVDINAIREYAKTCNDIQHLRAEIRDFDAFDLRKRLPAVVSKLYKAIKGNGGVTYIHCTAGLGRAPAVALAYMFWVLGYKLNDAHTLLQSKRSCFPKLDAIKSATADILTGLSKKRVTLSWEDSNCSTVEISGLDIGWGQRIPLHLDDKEGTWFLKRELPEGLYEYKYIIDGEWTCNKDELLTSPNKDGHVNNFVQVLDNTNSVRASLRERLTGDDPDLTKEERLRIKEFLETFPNEDQ	252

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste4g03212	252	Gene3D	Immunoglobulins	125	215	IPR013783	-
	Pste4g03212	252	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	21	112	IPR029021	-
	Pste4g03212	252	Gene3D	Protein tyrosine phosphatase superfamily	11	243	IPR029021	-
	Pste4g03212	252	SUPERFAMILY	E set domains	129	211	IPR014756	-
	Pste4g03212	252	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	47	105	IPR000387	GO:0016311\|GO:0016791
	Pste4g03212	252	CDD	E_set_AMPKbeta_like_N	130	210	-	-
	Pste4g03212	252	PANTHER	DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN	10	249	-	-
	Pste4g03212	252	FunFam	Phosphoglucan phosphatase DSP4, chloroplastic	125	215	-	-
	Pste4g03212	252	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	1	127	IPR020422	GO:0006470\|GO:0008138
	Pste4g03212	252	Pfam	Dual specificity phosphatase, catalytic domain	14	108	IPR000340	GO:0008138\|GO:0016311

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste4g03212	Pste-Chr4	23852302	23858329	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste4g03212	10	246	Protein tyrosine phosphatase (PTP) family	AT3G52180	68.776	1.59e-120	343

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