Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03212 ATGAACCATTGTGTTTCTTTACTGCTACTTGGATATTTTGGAGTTGATATTAATGCCATACGAGAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTTGATGCATTTGATCTACGAAAGCGGCTTCCAGCTGTAGTCAGCAAATTATACAAGGCAATAAAGGGCAATGGAGGTGTAACATATATACATTGCACTGCTGGACTAGGAAGAGCTCCAGCTGTTGCGTTGGCTTATATGTTTTGGGTTCTGGGTTATAAACTTAACGATGCCCACACACTACTTCAGAGCAAAAGGTCCTGCTTTCCAAAACTGGATGCCATAAAAAGTGCAACAGCTGATATTCTTACAGGCCTCAGTAAGAAGCGTGTCACTTTGTCATGGGAAGACAGCAATTGCTCTACTGTGGAAATTTCTGGACTTGATATTGGATGGGGGCAGAGAATACCCCTACATTTGGATGACAAAGAGGGTACGTGGTTTCTCAAGAGGGAATTGCCTGAAGGACTCTATGAGTATAAGTACATTATTGATGGGGAATGGACATGCAATAAAGATGAGCTTCTAACCTCTCCCAACAAAGATGGCCATGTCAATAATTTTGTTCAAGTCCTTGACAATACCAACAGTGTTCGAGCCTCCCTCCGGGAGAGATTGACTGGTGATGATCCTGATCTCACAAAGGAGGAACGTCTGAGAATAAAGGAGTTTCTTGAAACTTTTCCTAATGAGGATCAGTAAATCATCGCGCGTGGTTGTTGATATGTAAAGTAATAGATGCAGGCATACATATTACCTAATAAGATTGAATCTAAACTTTGGATACGGTCGCTGTTTCAGTTATAATTCTGCGATGCCGCTGTTTATTGAGTTCCATAGCAATAAAATGTCTTAGCGATATTTAAATA 926 0.4082 MNHCVSLLLLGYFGVDINAIREYAKTCNDIQHLRAEIRDFDAFDLRKRLPAVVSKLYKAIKGNGGVTYIHCTAGLGRAPAVALAYMFWVLGYKLNDAHTLLQSKRSCFPKLDAIKSATADILTGLSKKRVTLSWEDSNCSTVEISGLDIGWGQRIPLHLDDKEGTWFLKRELPEGLYEYKYIIDGEWTCNKDELLTSPNKDGHVNNFVQVLDNTNSVRASLRERLTGDDPDLTKEERLRIKEFLETFPNEDQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03212 252 Gene3D Immunoglobulins 125 215 IPR013783 -
Pste4g03212 252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 21 112 IPR029021 -
Pste4g03212 252 Gene3D Protein tyrosine phosphatase superfamily 11 243 IPR029021 -
Pste4g03212 252 SUPERFAMILY E set domains 129 211 IPR014756 -
Pste4g03212 252 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 47 105 IPR000387 GO:0016311|GO:0016791
Pste4g03212 252 CDD E_set_AMPKbeta_like_N 130 210 - -
Pste4g03212 252 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 10 249 - -
Pste4g03212 252 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 125 215 - -
Pste4g03212 252 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 127 IPR020422 GO:0006470|GO:0008138
Pste4g03212 252 Pfam Dual specificity phosphatase, catalytic domain 14 108 IPR000340 GO:0008138|GO:0016311
Pste4g03212 252 SMART dsp_5 2 120 IPR020422 GO:0006470|GO:0008138
Pste4g03212 252 Pfam Glycogen recognition site of AMP-activated protein kinase 130 213 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03212 Pste-Chr4 23852302 23858329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03212 10 246 Protein tyrosine phosphatase (PTP) family AT3G52180 68.776 1.59e-120 343