Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03176 TGAATTTTGAGACACACTCCTCCCCAAAGGACAAAGAATCTCACTTGGAGAATCATCAACTTACTCAAAAGTTTGAAATATCATGAGGGTATGGATGTCAGTGGGATTTCGTCTACTCACAATCACTATTTTCTCTGCCTTTGATAACTAAGCCATTCTGTTTCTTCATGCAGCATAAATCACTCAGTGTCGCATGCTTCACGAAAAAACCAAATATAGGATGTGCTTGAGGAACTGAAATGTTGTCTGAAGAAATTGGTTTGAATGATGTCATAAATTTTCATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGTCAAAGGACGACAAAAAGTCAAGCAAATGGGGTTGGAGTTTTGGAAGGTTTAAGAAGAAACAATATCCTACAATTACAGCTCCAAATAGGACATTGATTGAAGCAAGTGCAGAGCAGAGAAAGCACGCTTTAACTGTGGCTATTGCAACAGCAGCTGCTGCTGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACCGGGGCTTCTCGTTCTTACTCGTATCTTCCCAAGGGAGACAGAAGCTTGGCTGCAATCAAGATTCAAAGCGTGTACCGTGCACATCTTGCTAGGAAAGCACTAAGAGCATTGAAGGGAGTTATAAGATTGCAAGCCATAATTCGTGGTCAAGCTGTGAGACGTCAAGTGTCAAAAACTTTGCAAAATTTGCCCTCCTATCCAAGAAATCGGGTGGAAATTCAGGAAAGCAGTAGTCATGTTGCTGAACAGATCAAGCAAAGTCCAAAGCAAAAGAAAAAGTTAGAAGATAAGGAACTGAAGTCTGAATGCCATAGTCAAAGAACATGGGATTGTAGCTTGCTCTCAAGAGAAGACATTGAAGCTATATGGTTTAGAAAACAAGAGGCCATGGTCAAAAGAGAGCGAATGAAGCAATACTCTTCTTCACAAAAGGAGAGAAAAAATCCTCAAATGGTGGAAGAATCATCTGTAGTACACAGCAAGGACTTTGGAAGAGAGAGCTGCCGTACACTTGGAGAGTGGCTACATAAAGAGACATGTGATTGGAATGTGCTTTATAAACCAACTCTTCCTTCAAACTTGTTAACAATAAAAAATGATTTGCAAGAAGAAGGGTTGAGTCCACAAATTTCAATCCCAAGGAAATCATTTTCTCTTGTAAAAAGAAGTCTCAATGGGGATGAGAGTTCTTGTTCCATGTCAAATTCTACAGTTTTTCCTACATACATGGCTGTTACTGAATCCAGCAAAGCAAAGATGAGGTCTATTAGCACACCAAAGCAAAGAACAGGTATTATGGATATATGCTCCAATCACAATGAGCCTCACAATGAAGGAGTTTCCTTTTACTCTTCTTATTATGGTGCAACTAGTAGCACCAATATTGGAAATGGTGCAAGTTGTCAACAAAGATGCTAGAGTGCAACTAGGCTTTGTTATCACTATAAGATGTACAATCTCGTTCAATGCATGATTTGCTGAAGTCATCAGAAGTATGGAGGGAATACTAAGTTTATTTCATGTTTGGTCCTTCACATACATGTATGAAGTGGTTTTGGTCTGACCCTTATATATATGTTTTTGAACAAAATTTTCTTACTGGTTTTGGAGATGAGAAAATGTTACTACTTACCATTGAGTACATAATACATATATGAC 1707 0.3943 MAKRKSWFGWVKRLFTSESKDDKKSSKWGWSFGRFKKKQYPTITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSYLPKGDRSLAAIKIQSVYRAHLARKALRALKGVIRLQAIIRGQAVRRQVSKTLQNLPSYPRNRVEIQESSSHVAEQIKQSPKQKKKLEDKELKSECHSQRTWDCSLLSREDIEAIWFRKQEAMVKRERMKQYSSSQKERKNPQMVEESSVVHSKDFGRESCRTLGEWLHKETCDWNVLYKPTLPSNLLTIKNDLQEEGLSPQISIPRKSFSLVKRSLNGDESSCSMSNSTVFPTYMAVTESSKAKMRSISTPKQRTGIMDICSNHNEPHNEGVSFYSSYYGATSSTNIGNGASCQQRC 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03176 394 SMART iq_5 102 124 IPR000048 GO:0005515
Pste4g03176 394 Pfam Protein of unknown function (DUF4005) 318 352 IPR025064 -
Pste4g03176 394 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Pste4g03176 394 PANTHER IQ-DOMAIN 5-RELATED 4 365 - -
Pste4g03176 394 MobiDBLite consensus disorder prediction 163 187 - -
Pste4g03176 394 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Pste4g03176 394 Gene3D - 102 151 - -
Pste4g03176 394 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Pste4g03176 394 MobiDBLite consensus disorder prediction 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03176 Pste-Chr4 23496822 23500911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03176 1 383 IQD Protein Family AT5G03960 44.638 8.55e-75 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03176 4 23496822 23500911 Pste4g03176 4 23496822 23500911 ECH