Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03170 AAGTTAACTGTGGAGAGTGTGAACAATGGCTGAATACGACCTAACCCCTCGGATGGCGCCGAATTTGGACCGGCACTTGGTGTTCCCTCTCTTGGAATTTCTCCAGGAGCGTCAGCTATACGACGATGACCACATCCTCAAGGCAAAGATCGATCTTTTGAACAATACCAATATGGTGGACTATGCTATGGACATCCACAAAAGCCTCTACCACACCGAGGATGTCCCACAGGACATGGTCGAGCGCAGGGTCGAGGTTGTTGCGCGGCTTAAGTCCCTTGAGGAGGGTGCCGCTCCCCTTGTGGCCTTCCTACAGAACGCTGCCGCCGTGCAGGAGCTCCGGGCTGATAAGCAGTATAATCTGCAGATGCTCAATGATAGATACCAGCTGGCGGCTGAAATTTTGATGCAGAACTGGGATATTGCTCTTGAGGAGCTCAATCGTTTGAAGGAAATCATTGACTCGAAGAATTTTTCATCACCTTTGAATCAGGTCCAAAGCAGAATATGGCTGATGCATTGGAGTCTGTTCATCTTTTTTAACCATGACAATGGTAGAACACAGATAATTGATCTGTTCAATCAGGACAAGTATCTAAATGCTATCCAAACTAGTGCTCCTCACCTTTTACGATACTTGGCCACAGCATTCATTGTTAACAAGAGAAGGAGGCCTCAATTCAAAGATTTTATTAAAGTTATTCAACAAGAGCAACATTCATATAAGGACCCTATCACTGAGTTTTTGGCTTGTGTTTATGTCAACTATGACTTTGATGGGGCTCAAAAGAAGATGAGGGAATGTGAAGAAGTGATTCTAAATGATCCCTTCCTTGGCAAAAGAGTTGAAGAAAGCAACTTTTCAACAGTACCTCTAAGGGATGAGTTCCTTGAAAATGCTAGGCTATTTATCTTTGAGACATACTGTAGAATACACCAACGCATTGACATGGGAGTGCTTGCTGAAAAGTTAAATTTGAATTATGAGGAGGCTGAAAGATGGATTGTTAATCTGATCCGAAGTTCAAAGCTTGATGCCAAAATTGATTCTGAAACTGGAACAGTTATCATGGAACCGAATCATCCCAATGTGTATGAGCAACTGATAGAGCATACCAAACCCATTAATGGCGCACTTACAAGTTGGTCAGTCAACTTGTGGAACATGTTCAAACTCAAACAGCACGATAACTGTGTAGGTAGATAGCTGAGAGTTTTTGTTTTATCTTTCCGGATGCATCATTTTGTTTTTGGTTTTGTCTATTTTGGATTTAGAATTCAAATTTATGGGCTGTTATTGTATACCTCTTGAAGTAGCTTCTTCTGAAGTTACTTGTGGATCCAAACAAGTGGTAGTATTGAATATTACCATTTTGCTTAAAATGTTTAAACTTTCTGATTGATCACGCAGCTGCAGGCATATTTGATCTTCGTCGTCATATTTGATCTTC 1451 0.4156 MAEYDLTPRMAPNLDRHLVFPLLEFLQERQLYDDDHILKAKIDLLNNTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKSLEEGAAPLVAFLQNAAAVQELRADKQYNLQMLNDRYQLAAEILMQNWDIALEELNRLKEIIDSKNFSSPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEEAERWIVNLIRSSKLDAKIDSETGTVIMEPNHPNVYEQLIEHTKPINGALTSWSVNLWNMFKLKQHDNCVGR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03170 393 PIRSF Transl_init_eIF3e 1 124 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pste4g03170 393 PIRSF Transl_init_eIF3e 120 389 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pste4g03170 393 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 384 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pste4g03170 393 Pfam PCI domain 236 350 IPR000717 -
Pste4g03170 393 SMART eIF3_N_2 5 123 IPR019010 -
Pste4g03170 393 CDD eIF3E 3 365 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pste4g03170 393 ProSiteProfiles PCI domain profile. 170 354 IPR000717 -
Pste4g03170 393 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 122 370 IPR016650 GO:0003743|GO:0005737|GO:0005852
Pste4g03170 393 Gene3D - 35 376 - -
Pste4g03170 393 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 283 367 IPR000717 -
Pste4g03170 393 FunFam Eukaryotic translation initiation factor 3 subunit E 179 381 - -
Pste4g03170 393 Pfam eIF3 subunit 6 N terminal domain 5 129 IPR019010 -
Pste4g03170 393 SUPERFAMILY "Winged helix" DNA-binding domain 283 354 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03170 Pste-Chr4 23251321 23254525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03170 4 369 Eukaryotic Initiation Factors Gene Family AT3G57290 77.108 0.0 651