Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03164 ACCCATCCTAGAGACCAATGTGATAGTTATGCATATTGTGGTCTCAACGCTAAATGCAACATAAATGGTTTTCCAATATGTAAGTGCTTGGACGGGTTCATACCAAAATTTCAAGCAAATTGTCGTGCTCAGAATTGGACGGGTGTGTGTGTGAGAATAGTGAAATTAAACTGCAATGGTGGAGATGGGTTTGAGAAGTACTCAGAAATGAAGTTGCCAGACACAACTTCTTCATGGTTTAACAAGAGTTTGAGCCTCAAGAAATGTGAGGCATTTTGTTTGAGAAACTGCTCTTGTAGTGCATATGCAAATTATACGAGAGACCGGGGAAGTGGTAGCATGCTTTGGTTTGGTGACATTGTGGACATGAGAACTCGCACAGCTCAAGGACAAGAAATTTACATCAGAATGGCCCTTTATGAACTAAGTCAGAAAAGCAATACGAACGTAAAGAAGCTTGCAGGGATTCTAACAGGAGTTCTTGCATTTATTATAGGATTGATAATTCTTGATGAAGATGACACACCAAATACATTTAATTTTTCAACCATCGATATTGCTACAAACCATTTTTCTGACATAAATAAGTTAGGGGAAGGTGGTTTTGGATTTGTATATAAGGTACTCAAATTTATTCACAAAGGCTTTGTTTACCAATACCCAAAGTTTTCAAAACGATTGCAGGGAATATTGGTAGATGGGCAAGAGATTGCAGTGAAGAGGCTTTCTAAGACTTCAAAACAAGGAATTAAGCAATTAAAAAACGAAGTGAAGTTGATGGCAACACTTCAGCATCCTAATATTGTTAAACTTCTTGGTTGTTCTATTCAACAAGATGAAAAGTTGTTGATATATGAATTCATGCCTAACAGAAGTTTGAATTGCTTTATTTTTGGTTTGAACTTTACACACCCATCAAATTTATTTGGTTATATGGCTCCAAAATATGTAATGGATGGATCTTTATCAACTAAATATGATGTTTTTAGTTATGGCGTTCTTGTACTTGAGATAATTAGTGGGAAGAAGAATCTTGGATTTTTTGACCCTCAAGATGAGGATTTGAAACTACTCATAGGCCATATCCAAGGAAGACCACTAGAATTAATAGATGACATGTTAAATGATGGTGCATCCTTATCTTCAGAAATATTAAGGTGCATTCATGTGGGTTTACTGTGTGTACAAGGGAACCCAAAAAATAGACCTAACATGTCATCTGTGATCTTAATATTAAATGGAGAAACATTGCTACCAAAACCAAGCGCGCCTGGGTTTTACACAGGAACTTCTTCAAGGCAACCTGAAATATATTCAATAAATGATGTTTCAATCTCATTCGAGGGGCCTAAACCCCACCATAGGATCAAGACACGCAGAGATTTGACCGCGCCACAATATGCAGACAAACAATCTAACTTGGGAGATTCAGATTGTTTTGGAGCAATGAGACTAGTAAATGCCAAAGATGGAACAGAGCAAAGACTCAAAAGTCTATCGGGCATGATAAGAATGCAGAAGTTGCTAAGT 1530 0.3706 THPRDQCDSYAYCGLNAKCNINGFPICKCLDGFIPKFQANCRAQNWTGVCVRIVKLNCNGGDGFEKYSEMKLPDTTSSWFNKSLSLKKCEAFCLRNCSCSAYANYTRDRGSGSMLWFGDIVDMRTRTAQGQEIYIRMALYELSQKSNTNVKKLAGILTGVLAFIIGLIILDEDDTPNTFNFSTIDIATNHFSDINKLGEGGFGFVYKVLKFIHKGFVYQYPKFSKRLQGILVDGQEIAVKRLSKTSKQGIKQLKNEVKLMATLQHPNIVKLLGCSIQQDEKLLIYEFMPNRSLNCFIFGLNFTHPSNLFGYMAPKYVMDGSLSTKYDVFSYGVLVLEIISGKKNLGFFDPQDEDLKLLIGHIQGRPLELIDDMLNDGASLSSEILRCIHVGLLCVQGNPKNRPNMSSVILILNGETLLPKPSAPGFYTGTSSRQPEIYSINDVSISFEGPKPHHRIKTRRDLTAPQYADKQSNLGDSDCFGAMRLVNAKDGTEQRLKSLSGMIRMQKLLS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03164 510 ProSitePatterns EGF-like domain signature 2. 27 41 IPR000742 -
Pste4g03164 510 Gene3D Transferase(Phosphotransferase) domain 1 299 417 - -
Pste4g03164 510 Gene3D Phosphorylase Kinase; domain 1 169 287 - -
Pste4g03164 510 Pfam PAN-like domain 58 123 IPR003609 -
Pste4g03164 510 CDD PAN_AP_plant 54 138 - -
Pste4g03164 510 ProSiteProfiles PAN/Apple domain profile. 58 138 IPR003609 -
Pste4g03164 510 ProSiteProfiles Protein kinase domain profile. 191 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03164 510 Pfam S-locus glycoprotein domain 2 36 IPR000858 GO:0048544
Pste4g03164 510 Pfam Protein tyrosine and serine/threonine kinase 310 409 IPR001245 GO:0004672|GO:0006468
Pste4g03164 510 Pfam Protein tyrosine and serine/threonine kinase 195 297 IPR001245 GO:0004672|GO:0006468
Pste4g03164 510 SMART ntp_6 59 137 IPR003609 -
Pste4g03164 510 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 403 - -
Pste4g03164 510 SUPERFAMILY Protein kinase-like (PK-like) 177 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03164 Pste-Chr4 23175122 23179052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03164 179 451 Receptor kinase-like Gene Family AT4G04510 33.913 1.44e-42 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g03164 PK_Tyr_Ser-Thr 3.2e-05 CL0016