Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03146 CTTTGAGTCTTTGACCTTCGCTACAAACCTCGTTTCGGTTTCTCTGTTAACTAAACACTCGGAAGTGACATAACAGAGGGAAGAAAGAAACAACCCCTAATCGAACGTTTGATGACGGAAATCGTTACATGTTCCGTCATAACGTCTGATTCCTCCGTCACGAACCCTAATCCCGCTTTCTCTAATGGCCACTGAAGATTACTCTCTCCTCGACTCTCCCTCCCACGCGCAGCCTCATCTCCACGCGCTCACGCGCCACTATTTCCCTTCCTCATCCTCTTCCAGTCCCACCACTCTCCCCGCCGCAGACTCCGCCACCGCCGATTACTATCCCCACGCCTCCTCCTTCTCCGACGACTCCACCAAATCCAATTCCAAACGCTTCTCCGGCGCCGGAAGTCCATACTACTTCAACAAGAAACTCAAGTCCGCCGCCGATCAGGATCTGGTGAACGACTCGGCGTTCCGCGGTGGCAGCGGAAGCGATTACGGAAAGGATAGAGAAGAATGGAGCGACACGGCGATCGCGTGTCTGTTGGAGGCGTACACGGAGAAGTTCAACCAGCTGAACCGCGGCAACCTCCGCGGCCGCGATTGGGAGGCGGTGGCGGAGGCGGTGGGGGTAGAGTGCGACGGTGGCGGAGAGGGAAAGCATGACAAGAGCGTGGAGCAGTGTAAGAACAAGATTGATAATTTGAAGAAGAGGTATAAGTTGGAGCTTCAGAGAATTGGGAGTGGTGGCATTGCCACTAGTCATTGGCATTGGTTTAAGAAGATTGAAGTTATTGTTTGCAACTCTCTCACTGTCAAAACTGTTTCTAATGATGACAAGGCCGGCAGCAGTGGTGGTGGTGCTAATTCTTCTTCTATGGTTAGGCAAACCCATAACAGATATACACCTAGCAATGCTATTGTGGCAAACAGCCTCAAAATGAAGCCAGCATCAAATCTAAAATGGCGTAGAGTTTTGTTTAAAATTAGTGGTTCTGCATTGTCTGGCAACAACCAGAATATTGACCCCAAGGTGCCAGTTTTGTTATTGGTTCTATTAAGCATTCATTGGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTGGTAACTTCTTTTGTGGAGATGCATGGGTCTGTGCTACCGGATTGGACAGACCTACCGCGTACCAAATAGGTATGATGGCAACAGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGTGTTCAGAGTGCATTCTCGATGCCAGAGGTTGCTGAACCATATAGCAGGCAACGAGCTATTAGGCATCTTGAGAAAGGAAGGGTTGTTATATTTGGTGGTGTTGGTGCAGGCATTGGAAATCCACTCTTTACCACTGATACAGCTGCAGCTCTCAGAGCTTCTGAGCTTAATGCTGATGCGGTTCTGAAAGGTACTAATACGAACGGTGTCTTTGACTGTCATCCTCGTAATGATAATGTAACACTCGATCACATTTCCTTTAGGGAAGCTGTTTCTAGGAGCTTCACTTTCATGGATATGATGGCACTGGCATATTGTGAAGAGAATGGAATACCTGTTGTAGTCTTCAACATGCTTGAACCAGGGAATGTTTCAAGAGCATTATGTGGAGATCAAGTTGGCACTTTACTCGATCAAACTGGTAGAGTGGAGCATCAGCTTCCTAGTTAATCGTGTATAAGTTGCTTATAATAATCTTATGGTATCACTTAATCTTGCATAAGTGTTCCCGTGCTTTTGTTTGTTTTTTGAGGCGGTGCATGTGAGCATAATGTATTTACCATGCACTCTTGATGATTCATTAGATTGAAGAGATAATACACATGTAACTTAACTTCGAAAATGTTGTACTTTTATCC 1917 0.4695 MATEDYSLLDSPSHAQPHLHALTRHYFPSSSSSSPTTLPAADSATADYYPHASSFSDDSTKSNSKRFSGAGSPYYFNKKLKSAADQDLVNDSAFRGGSGSDYGKDREEWSDTAIACLLEAYTEKFNQLNRGNLRGRDWEAVAEAVGVECDGGGEGKHDKSVEQCKNKIDNLKKRYKLELQRIGSGGIATSHWHWFKKIEVIVCNSLTVKTVSNDDKAGSSGGGANSSSMVRQTHNRYTPSNAIVANSLKMKPASNLKWRRVLFKISGSALSGNNQNIDPKVPVLLLVLLSIHWVAMQIAREVATACRLGVEVAIVVGGGNFFCGDAWVCATGLDRPTAYQIGMMATVMNSILLQSALEKLGVQARVQSAFSMPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGIGNPLFTTDTAAALRASELNADAVLKGTNTNGVFDCHPRNDNVTLDHISFREAVSRSFTFMDMMALAYCEENGIPVVVFNMLEPGNVSRALCGDQVGTLLDQTGRVEHQLPS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03146 514 MobiDBLite consensus disorder prediction 25 41 - -
Pste4g03146 514 Pfam Myb/SANT-like DNA-binding domain 106 199 IPR044822 -
Pste4g03146 514 Gene3D - 109 177 - -
Pste4g03146 514 FunFam Aspartate/glutamate/uridylate kinase family protein 109 177 - -
Pste4g03146 514 Gene3D - 249 510 IPR036393 -
Pste4g03146 514 FunFam Uridylate kinase isoform A 250 508 - -
Pste4g03146 514 MobiDBLite consensus disorder prediction 20 42 - -
Pste4g03146 514 PANTHER URIDYLATE KINASE 103 508 - -
Pste4g03146 514 Pfam Amino acid kinase family 260 482 IPR001048 -
Pste4g03146 514 SUPERFAMILY Carbamate kinase-like 256 501 IPR036393 -
Pste4g03146 514 CDD AAK_UMPK-PyrH-Ec 259 501 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pste4g03146 514 Coils Coil 161 181 - -
Pste4g03146 514 Hamap Uridylate kinase [pyrH]. 256 503 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03146 Pste-Chr4 23025807 23029223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03146 103 213 Trihelix Transcription Factor Family AT3G14180 39.286 5.17e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g03146 AA_kinase 2.2e-24 No_clan