Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03139 TTGATTTCACTTCTTCTCCTACAAGAGAAAGAAAGAATTACTCACTTCACTGGAGAAATTACCACTATAACACCGTTCTGTCCCATTCCCTCTTTCTCCTTTCTACAAATAATCATTCTTATATCTGGTGTTCGCCGGCCATGTGTTATGATTATTGGTTTCTTTTTGCTTATTAATGTGAAGGTCATAATCATAAATATGGTAAATCAAATGGTTGAACAAAATGTTATAACAGAAGGGCACGGGAAAAAGAAGAAGAGGAAGAAGGGAGTTCTGGTTCCTCGTCCTGCATGCTCATGGGTGTACTTTAGTAAGGAGTTTATTAAAGAGTACATTGCTTCCCATCCCGAGTCACCGGGCATTAAAGCTGCAACACAGGCTGCCTCAAATGTATGGAAGTTGATGAGTCTTGAAGAGAAGCAAAAATATACTAGGCATGCACGTGAAGTGTGGGATGGCTACTTGAGTTCAGGTGCTGTTCCTGAATCCAAGCCAAGTAAACAGGCTAAACTGGTAACCAGATGCTCTCCTGGTCGCTTGTTCAATGTGTTGCAGCACTTTACACCTGAACAGAAGGAGGCAGTTAAGAGCATAGGCTTTGGCAGCCTCCTTGGCCTTAGATGCAGAACACTTCGACGCAGTCTGTGTCTTTGGTTATTGGAGAGGTTTGACACTACTAATTGCAGTTTAGAGATCTGCAATGTGCATGTGCCATTGACTCCAAAAGATGTAGAGACAGTATTGGGATTATCAGCCAGTGGCAAAGAAGTGGTGAACTCTGGTCCAGAAGACTTGATTTCGGATTTACGTAATAGTTACAATGCAAAAAATCATGGAATTTCAGTGCGACTTTTAGAGGAGCGGTTGGCAACTGCGGAGGCTGGAGATGATTTTAAGAGGTCATTTGTTCTCCATGTGCTGGGAACACTTCTGTCCCCAACAGCTAGGCTGGATGTTAGCCCATCATTCCTCCACTTTTTGACAAATATGGATCTTGTCCACCAGTATAACTGGGGTAAATTCTTGCTTGATAGGCTGGTTCGAGAGGTATCACGCTTCCGTCAAGGGAAGCAAAGAGCTGTTGGTGGTTGTCTCTTATTTTTGCAGCTTTTCTACTATGAGAGCATATCTCTTGAAGGATCTTCAGCTTCAGTTACAACTATAGTTCCATATCTGTTTTCTTGGGGAGAGGAGGAGATTGCTGAGAGAGAAAAACAAGAAAAGGAACTTGGTGGCTATGGTTCTGGGGAGCTAGCAATCAGGAAGAAATGCCATCATACGGAATTCCCTGAGTATAGAGATCATCCAAATGGCCCACTAATCACCACAGAAAGCACTAGGATTGGGAATGGTCCTCTTGGACAACAATCAAATGAGGAAGGCATCCTCGATTTTCCCAGGAGTAGAACTGTGTTGAGTGGAGATGTGGATTTAGTAGTTGAATCAATCAAAGCTCCTTGTCAAAACAGAGAGTATGGTTGCAATGAAACTGTGGATTGCATGACCAGTGATGATCACGAAGTGACATGCATCTATTCTCCATGTGCCTGTCCACTTCCAGATTGCAACTATGTTGGGCCTTTGGAAAGGTTGGCATTGCATTTCGGCAGTGAACACTGGGATTCTGGAAGGCAATTCAAATATAATCATCTATTGGCTATCACTTTACAGATGGACGAACAATTCCTTGTTCTCCAGGCTGAAGAAGATGGGATTCTCTTTCTCCTCAACAGGGGCACAGAAACTAATGGGCATACATTGATGATAACCTGTATTGGTCCTAACTCATTAAAAGAGAGGTTTATGTATGAGATTGTTTCATGTAAGGGAAGAAGTTCTCTCAGATTAAAGACTGTTGCTGAGAATTTTCCTGGTCGAATGAAGGATTTTCCCCCAGTAGATTTTCTTTTGATTCCTTTCAATTTTCTTGTTTCTTCCGGGGAGCTCAACATAGATATTTGTATATGGAATTCTAATGAGCATAATGTAGATTGCTGTTGATTTGTAACCTCGATTGTAGATAATTTATTTAGTGAGAATTATGTCAACTGGCATTTTATTTATCAGATTTTTCAGGCATTTCTTTA 2087 0.4145 LISLLLLQEKERITHFTGEITTITPFCPIPSFSFLQIIILISGVRRPCVMIIGFFLLINVKVIIINMVNQMVEQNVITEGHGKKKKRKKGVLVPRPACSWVYFSKEFIKEYIASHPESPGIKAATQAASNVWKLMSLEEKQKYTRHAREVWDGYLSSGAVPESKPSKQAKLVTRCSPGRLFNVLQHFTPEQKEAVKSIGFGSLLGLRCRTLRRSLCLWLLERFDTTNCSLEICNVHVPLTPKDVETVLGLSASGKEVVNSGPEDLISDLRNSYNAKNHGISVRLLEERLATAEAGDDFKRSFVLHVLGTLLSPTARLDVSPSFLHFLTNMDLVHQYNWGKFLLDRLVREVSRFRQGKQRAVGGCLLFLQLFYYESISLEGSSASVTTIVPYLFSWGEEEIAEREKQEKELGGYGSGELAIRKKCHHTEFPEYRDHPNGPLITTESTRIGNGPLGQQSNEEGILDFPRSRTVLSGDVDLVVESIKAPCQNREYGCNETVDCMTSDDHEVTCIYSPCACPLPDCNYVGPLERLALHFGSEHWDSGRQFKYNHLLAITLQMDEQFLVLQAEEDGILFLLNRGTETNGHTLMITCIGPNSLKERFMYEIVSCKGRSSLRLKTVAENFPGRMKDFPPVDFLLIPFNFLVSSGELNIDICIWNSNEHNVDCC 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03139 666 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 93 149 IPR009071 -
Pste4g03139 666 SUPERFAMILY TRAF domain-like 482 655 - -
Pste4g03139 666 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 478 535 IPR013083 -
Pste4g03139 666 Gene3D High mobility group box domain 78 156 IPR036910 -
Pste4g03139 666 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 143 658 IPR044286 -
Pste4g03139 666 Pfam Plant mobile domain 240 377 IPR019557 -
Pste4g03139 666 SMART hmgende2 92 165 IPR009071 -
Pste4g03139 666 Pfam HMG (high mobility group) box 94 155 IPR009071 -
Pste4g03139 666 SUPERFAMILY HMG-box 79 154 IPR036910 -
Pste4g03139 666 ProSiteProfiles Zinc finger SIAH-type profile. 482 540 IPR013010 GO:0008270
Pste4g03139 666 CDD HMG-box_SF 95 154 - -
Pste4g03139 666 Pfam Seven in absentia protein family 477 622 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pste4g03139 Sina 2e-14 CL0389