Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03124 AGGACAGAAGCAAGTGAGAGGCTTCTCTCATCCTGTGTCTTGTGTACACTTTTGCTTTTTTCTCTCACTGTCTGAGGCGAAGATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGTCGGCTTATACCAGCCAGAACCCATTTGAACACTTCAAACACACACCTATTTGAGCCTCTCTGTGTTCACCATGCTTTCAGTGCGGCTGCTACTACTACTCCACCAAACACCACCTATGACCCCAGCAACATGGTTGGGGATAACGTTTTCTTCACTCCCTTCGCTCATCATCATGACTATTCTTCTTCCTCTGGTGTCAATCTGACTACTGCTGCCACTGCCACTGTCTCGGATCATGCATTCTGCAGCATAGAGAGTGCAGATAAAGGGTGGTTTGGCTTTGATTCCGGGAACAACAGGTGGCCTAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTCGATTCCAAGTTCAGAGAGAATAATCAGAAGGCACCCTTATGGAATGAGATTTCTAGGATAATGGCCGAGGAATTTGGGTACCAAAGGAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACAAAGGAAGGTAAAGCTAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCGATATGTGGAGATCAAGCAAACACTGCTCATGCCTCAACTTCCGATAAAGCCCATCGTGCTGGCGGAAACACTGCCACTATTCAAACACAAACATTCAGCATTAACCGAGACCACAATGGAGATTCCCATAACAACCCCAAGTGCTCAGAGAGCATCAGCATCTCAAATTCATCTGAATTCGAGACATCCTCTTCTGAAAACAACGATGAGGACCTTTCTGCCGTTGCCTTCATGATGAAGCAGTCGAGGGAGAAGCAGAAAGGGTTGGATCATAGGCAAAGTGAGCACAGGAGGGTAAGAAAAAGCTGTAGAGCTAAGGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGTGTTGTTGAACAAAGAGAGCAAGAGATGGCAACTAAGGAGGAAGAAAGGAAGAGAAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCCAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACATTGGGATAGGACTTGAAGCATTGCCATTGGATGAAGCTATGGTTGAAGAACCCGCAAATAGGAACAAAGTCCAGGGAAACACTGATGCAAATGAATTACCGTCTGAGGTTGTTGATCATAGAAGTAGTAGTAGGTGGACAGAAATGGAGATTTCAAATTTGATACAGCTAAGGACTAGTTTTGAGCAAAGATTCAGAGACAATGGGTACTTGGAGAATGGGCTTTGGGATGAAATAGCAGCAAAATTGGCTTGTTTGGGGTTTGATAGGAGTGCAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTCAGAAGGACAGTGGATGAGTATGATGGTGCAAAAAGATCAAGGCCTTGGTATTTGGGACTTAAGCTGACGGATGATGATGATCTT 1627 0.4524 MGDPYGLPEDLRRLIPARTHLNTSNTHLFEPLCVHHAFSAAATTTPPNTTYDPSNMVGDNVFFTPFAHHHDYSSSSGVNLTTAATATVSDHAFCSIESADKGWFGFDSGNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTAHASTSDKAHRAGGNTATIQTQTFSINRDHNGDSHNNPKCSESISISNSSEFETSSSENNDEDLSAVAFMMKQSREKQKGLDHRQSEHRRVRKSCRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMATKEEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVRKHIGIGLEALPLDEAMVEEPANRNKVQGNTDANELPSEVVDHRSSSRWTEMEISNLIQLRTSFEQRFRDNGYLENGLWDEIAAKLACLGFDRSASECKQIWDEISISLRRTVDEYDGAKRSRPWYLGLKLTDDDDL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03124 515 MobiDBLite consensus disorder prediction 231 265 - -
Pste4g03124 515 ProSiteProfiles Myb-like domain profile. 419 484 IPR001005 -
Pste4g03124 515 PANTHER FI21293P1 75 499 - -
Pste4g03124 515 FunFam trihelix transcription factor PTL-like 113 175 - -
Pste4g03124 515 Coils Coil 323 350 - -
Pste4g03124 515 ProSiteProfiles Myb-like domain profile. 111 170 IPR001005 -
Pste4g03124 515 CDD GT1 425 490 - -
Pste4g03124 515 CDD GT1 111 177 - -
Pste4g03124 515 SMART sant 109 172 IPR001005 -
Pste4g03124 515 SMART sant 423 486 IPR001005 -
Pste4g03124 515 FunFam Trihelix transcription factor GT-2 427 489 - -
Pste4g03124 515 Pfam Myb/SANT-like DNA-binding domain 425 503 IPR044822 -
Pste4g03124 515 Pfam Myb/SANT-like DNA-binding domain 111 198 IPR044822 -
Pste4g03124 515 Gene3D - 113 175 - -
Pste4g03124 515 Gene3D - 427 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03124 Pste-Chr4 22810211 22812772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03124 112 489 Trihelix Transcription Factor Family AT5G03680 43.687 3.05e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g03124 Myb_DNA-bind_4 4.4e-19 CL0123