Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03105 ATGGCGAGGTTTATGAATCTGGACGAGTTCGAATTGAACCCTAGAGACCGCTCCATTGAATCCTTCAGCAAATGGCGTTCGGCTCTGTGGCTCGTCAAGAACCCTCGCCGAAGGTTCCGATGGGTTGCGGATCTCGCCAAACGCAAACACAATCAGGAAAAACTCCAAAAATTGCAGGGAACAATTCGGGCCATTATATATGCAGGAAGGGCTGCAGTGCAATTTATAGGAGCTATTACTCCAGCTGAATACAAGGTGTCAGAAACGACAAGAAAAGCTGGTTTTGGTATTGAACCGGATGATATTGCATCCCTCGTTCGAGGCCATAATTACAAGAACTATAAAAAAATTGGTCAAGTTGAAGGGATTACAGAGAAACTCGACGTCTCTGTGGACGATGGTGTTGGTGAAGACAGTATAGATACCAGGCAAGATATTTATGGAGTCAACCGTTATACTGAAAAACCATCTAAAAGCTTCCTGATGTTTGTTTGGGAAGCGCTGCATGACTTGACACTTATCATTCTCATGGTTTGTGCTTTAGTTTCTATAGGTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTAGTAATTGTTACTGCTATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTGGACAAAGAAAAGAAAAAGATTTTTGTTCAGGTCACGAGGAACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCCCGCTGATGGAGTTTTTATATCAGGGTATTCTTTGGTCATTGATGCATCAAGTCTGACAGGTGAGAGCGATCCAGTAAATATAGATGAGAAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGCTGATGGAAACTCTAAGTGAAGGAGGAGAGGACGAGACTCCACTGCAGGTGAAATTGAACGGAGTTGCTACAGTTATTGGTAAGATAGGTCTGTGTTTTTCTATACTGACATTTGTGGTGTTGACAATAAGGTTTGTGGTTGAAAAAGCAATACATGGTGAGTTTGGTAGTTGGTCTTCAAGTGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCAGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCGTTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAGTTAATGAAGGATAAGGCACTTGTGAGACATCTGGTTGCGTGTGAGACTATGGGTTCGGCAACTTGCATCTGCACAGATAAAACAGGAACATTAACCACTAACCATATGGTGGTAAATAAAATTTGGATATGTGGAAAGAGCATGGAGATTAAAGGTAATGAGAGTGTTGACACACTGAAGACAGAGATATCTGAAGAGGTTTTAAGCACTCTTTTGCGGGCTATATTTCAAAATACTTCCTCAGAAGTAGTTAAGGACAAAGGTGGAAAAACTTCAATATTGGGAACACCAACAGAAACAGCTATATTAGAATTTGGCTTACTTTCAGGTGGTGATTTTGATGCCCAGCGTGAAACATATAAGATAATTAAGGTTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTACGTCTTCCTGATGGAGGCATCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAAATGTGTGACAAAGTTATTGATCCTAGTGGAACGGTTGTTGATCTTTCTGTTGAGAAGGCAAAGAATATCACTGACATTATAAATGGTTTTGCCAATGAAGCTTTGAGAACTCTTTGTTTAGCTGTCAAAGATGTAAATGAAACTGAAGGGGAAACCTGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTCAAACTTGTTTAACTGCTGGAATAACTGTCCGCATGGTAACTGGTGATAACATAAATACGGCTAGGGCTATTGCTAGAGAATGCGGCATACTTACAGAGCATGGTGTAGCCATAGAAGGACCCCATTTTCGTGACTTGTCTGAAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCACGATCCTTACCTCTTGACAAGCATAACTTAGTAACCCATTTGAGGAAGTATGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGTATAGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCGCTACTATTGTCAATGTGGCTAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTCGAAGGATAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTTCTCACTTTTGACGGGAAGAGGCTTCTGGGAATTAATGGTTCAGATGCAACCAGGGTGGTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCAGAGAGATTGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTTACCGTGATTTTCTCCACAGTGATATTTCAAGTAGTCATAGTGGAGTTCCTAGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTACTCAGTGTGGTAATTGGAGCATTCAGCATGCCTATATCTGCTATACTCAAGTGCATCCCTGTTGAAAAAGGAGATTCTACAATACATCATGATGGTTATGAGGCACTGCCTTCTGGTCCCGAACTGGCATAA 3105 0.4145 MARFMNLDEFELNPRDRSIESFSKWRSALWLVKNPRRRFRWVADLAKRKHNQEKLQKLQGTIRAIIYAGRAAVQFIGAITPAEYKVSETTRKAGFGIEPDDIASLVRGHNYKNYKKIGQVEGITEKLDVSVDDGVGEDSIDTRQDIYGVNRYTEKPSKSFLMFVWEALHDLTLIILMVCALVSIGIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRNRKRQKVSIYDLVVGDIVHLSTGDQVPADGVFISGYSLVIDASSLTGESDPVNIDEKRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLCFSILTFVVLTIRFVVEKAIHGEFGSWSSSDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLVACETMGSATCICTDKTGTLTTNHMVVNKIWICGKSMEIKGNESVDTLKTEISEEVLSTLLRAIFQNTSSEVVKDKGGKTSILGTPTETAILEFGLLSGGDFDAQRETYKIIKVEPFNSVRKKMSVLVRLPDGGIQAFCKGASEIVLKMCDKVIDPSGTVVDLSVEKAKNITDIINGFANEALRTLCLAVKDVNETEGETCIPEDSYTLIAIVGIKDPVRPGVREAVQTCLTAGITVRMVTGDNINTARAIARECGILTEHGVAIEGPHFRDLSEEQMKSIIPRIQVMARSLPLDKHNLVTHLRKYGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFATIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVRRITNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLGINGSDATRVVNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVIFQVVIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISAILKCIPVEKGDSTIHHDGYEALPSGPELA 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03105 1034 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Pste4g03105 1034 SMART Cation_ATPase_N_a_2 116 188 IPR004014 -
Pste4g03105 1034 Pfam Cation transport ATPase (P-type) 507 591 - -
Pste4g03105 1034 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Pste4g03105 1034 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Pste4g03105 1034 Pfam E1-E2 ATPase 236 430 - -
Pste4g03105 1034 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 49 IPR024750 GO:0005516
Pste4g03105 1034 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 661 IPR023299 GO:0000166
Pste4g03105 1034 FunFam Calcium-transporting ATPase 648 796 - -
Pste4g03105 1034 SUPERFAMILY HAD-like 450 856 IPR036412 -
Pste4g03105 1034 Gene3D - 166 1010 - -
Pste4g03105 1034 Gene3D - 448 796 IPR023214 -
Pste4g03105 1034 FunFam Calcium-transporting ATPase 768 1014 - -
Pste4g03105 1034 Gene3D - 461 656 IPR023299 GO:0000166
Pste4g03105 1034 NCBIfam HAD-IC family P-type ATPase 547 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 NCBIfam HAD-IC family P-type ATPase 717 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 NCBIfam HAD-IC family P-type ATPase 203 478 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste4g03105 1034 Gene3D - 134 334 - -
Pste4g03105 1034 SFLD Haloacid Dehalogenase 433 804 - -
Pste4g03105 1034 CDD P-type_ATPase_Ca_PMCA-like 140 884 - -
Pste4g03105 1034 Pfam Cation transporter/ATPase, N-terminus 119 183 IPR004014 -
Pste4g03105 1034 FunFam Calcium-transporting ATPase 213 334 - -
Pste4g03105 1034 Gene3D - 17 77 - -
Pste4g03105 1034 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Pste4g03105 1034 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1012 IPR023298 -
Pste4g03105 1034 PANTHER CATION TRANSPORTING ATPASE 88 1012 - -
Pste4g03105 1034 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Pste4g03105 1034 SFLD p-type atpase 433 804 IPR044492 -
Pste4g03105 1034 FunFam Calcium-transporting ATPase 461 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03105 Pste-Chr4 22604762 22615790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03105 62 1031 Primary Pumps ATPases AT3G57330 71.679 0.0 1434