Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03096 ATGGAGTTGGTAGCTTGGGGATTTCTCCTTGTGTTGGCATGTGTCTCCATTAGTTCATTCCTGGCTACAACAACCAGAAAAGCAAAGCACAATCTTCCACCAGGGCCTTCACCCCTTCCCATAATTGGAAACCTCCTTGAACTAGGTCAAAAGCCACACCAATCTTTGGCCAAGCTGGCCAAGATTTATGGGCCTGTGATGAGCCTCAAGCTAGGGAGAGTAACCACTATAGTCATCTCCTCTGCTGACATGGCAAAAGAAGTTCTTGTAACACATGATGAACTTTTGTCAAACCGCCCAATACCCCAAAGTGTGGCAGTTCTCAACCACGAGCTCTATAGCCTAGCCTTCTTACCCGTTTCACCCCTTTGGAGAGAGTTGAGAAAAATATGCAATGGTCAACTATTTGCACACAAGACTCTTGATGAAAGCCAACACGTGAGACGCAGCATAGTGCAACAACTCCTAAGGGATGTGCACGAGAGCTGCCACATTGGTGAAGCAGTGGATGTTGGAAGACTAGCGTTTAAGACCACAATAAATATTTTATCAAACACCATTTTCTCTGAGGATTTGGTTTTGTCTAAAGGTACAGCGGAAGAGTTTAAGGACTTGGTGATCAACACGACAAAACTTGTTGGATCACCAAACATAGCAGAGTATTTCCCTGTGCTCAAGAGGATTGACCCGCATGGTGTGAAAAGGCAACAAACTAAGAACGTTGCCAAGTTGTTGGACATGTTTGACGGCTTAATTAGAAAACGCTTGAAGCTGAGGAAAGCACAGGTTCTGTCTCGCACAATGACATATGCCTTGCTCCACATTTCGAAAGACAACCAGATGATGGACAAAACAATGATTCAACACCTGGCACATGATCTGTTTGTTGCGGGCACGGATACAACATCCTCAACTTTGGAGTGGGCAATGGCTGAGGTGATATTCAACAGAAAGGTGATGTCAAAAGCGAAAAAAGAGATGGAAGAAGTGATAGGCAAAGGTAAAGCGGTTGAAGAATCAGATAGTGGTAAACTCCCATACTTAGAAGCAATAATAAAAGAGACTTTCCGGTTGCACCCCCCGGTTCCTTTGTTACTCCCTAGAAAGGCAGAAAGAGACGTTGACTTATGTGGCCTCACCGTTCCAAAGGATGCACACGTGTTAGTTAACGTGTGGAATATTGGCAGGGATCCAACCTTATGGGACAATCCTACTTTATTCTCACCTGAGAGGTTCTTCGGCTCAAACTCTAAGATTGACACCAAAGGTCGAAACTTTCAGCTTTTACCATTTGGTGCTGGAAGGCGCATATGCCCTGCAGTAACGTTAGCTATTAGGATGTTGCTCTTGATGTTGGGTTCACTAATTAACTCCTTTGATTGGAAGCTTGAACATGACATTCAACCACAACATATGGATATGGAGGAAAATTTTGGAATTACCTTACAAAAAGCTCAATCCCTTCGAATTGTTCCTCTTAACAGAAGCAACTAA 1494 0.4384 MELVAWGFLLVLACVSISSFLATTTRKAKHNLPPGPSPLPIIGNLLELGQKPHQSLAKLAKIYGPVMSLKLGRVTTIVISSADMAKEVLVTHDELLSNRPIPQSVAVLNHELYSLAFLPVSPLWRELRKICNGQLFAHKTLDESQHVRRSIVQQLLRDVHESCHIGEAVDVGRLAFKTTINILSNTIFSEDLVLSKGTAEEFKDLVINTTKLVGSPNIAEYFPVLKRIDPHGVKRQQTKNVAKLLDMFDGLIRKRLKLRKAQVLSRTMTYALLHISKDNQMMDKTMIQHLAHDLFVAGTDTTSSTLEWAMAEVIFNRKVMSKAKKEMEEVIGKGKAVEESDSGKLPYLEAIIKETFRLHPPVPLLLPRKAERDVDLCGLTVPKDAHVLVNVWNIGRDPTLWDNPTLFSPERFFGSNSKIDTKGRNFQLLPFGAGRRICPAVTLAIRMLLLMLGSLINSFDWKLEHDIQPQHMDMEENFGITLQKAQSLRIVPLNRSN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03096 497 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 494 - -
Pste4g03096 497 CDD CYP76-like 60 492 - -
Pste4g03096 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Pste4g03096 497 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 Gene3D Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g03096 497 FunFam Cytochrome P450 76C4 24 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03096 Pste-Chr4 22493442 22495016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03096 1 495 Cytochrome P450 AT2G45550 44.401 6.66e-153 444